KEGG   Ipomoea nil (Japanese morning glory): 109187948
Entry
109187948         CDS       T04663                                 
Name
(RefSeq) switch 2
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
ini  Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:ini00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ini03400]
    109187948
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    109187948
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C DEAD ResIII ERCC3_RAD25_C HDA2-3 SWI2_SNF2
Other DBs
NCBI-GeneID: 109187948
NCBI-ProteinID: XP_019193932
LinkDB
Position
Un
AA seq 871 aa
MSLNAFKEALKPCNNQSSSNSSQTSLISTQFDSSAVNPRKPPKSSLSRQLLLLEDSSTSS
SWTQSQRPQKQTHSSIGVKDEKEEEEEEKPLTFGRSKLESFVLDHTGPYEPLVLSPPGET
PLVQVPASINCRLLEHQRVGVKFLYGLYWNNHGGVLGDDMGLGKTIQTIAFLAAVYGKDA
DVTDSTSISGDLERKGPVLVVCPTSVIHNWENEFSKWATFSVYVHHGPNRELIIEKLERY
GVEITITSFDTYRIHGSILSDVQWEIVIVDEAHRLKNDKSKLYQACLEIKTKKRYGLTGT
IMQNKIMELFNLFDWVVPGCLGTREHFREFYEDPLKHGQRSTASNRLVEVADERKQHLVS
VLQTYLLRRTKEETIGHLMLGKEDNVVCCAMSALQKRVYQRILQLPDIQCLINKDNPCSC
GSRLKQVECCKRIVPDGIIWPYLHRDNPDGCDSCPFCLVLPCIVKLQQVSNHLELIKPNP
KDDPDKQRKDAEFAAAVFGSDIDLVGGNTQNESFMGLSDVKHCGKMRALEKLMFTWISQG
DKILLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPTCSRQSLVDDFNSSPSKQVFLISTR
AGGLGLNLVSANCVVIFDPNWNPAQDLQAQDRSFRFGQKRHVVVFRLLAAGSLEELVYSR
QVYKQQLSNIAVSGKMEKRYFEGVQDCKEFQGELFGICNLFRDLSDKLFTSDIIELQENK
GKEDGGSLNLSELGMHFLPEKSSSLTSKCQEPKKRDTKLELEDLGIVYAHRNEDVVNLRP
VAIPTSEEQNMQQRKFAGVWRRELDAMNGKEKAGNSDEVVKMHKKRQYCRIAQFMGMKEL
QFSKWILSATPAEREKVLKDYKKRKEKVLNG
NT seq 2616 nt   +upstreamnt  +downstreamnt
atgtctttgaacgccttcaaggaggccctcaagccctgcaataatcaatcctcctcgaat
tcctcccaaacttcattgatttctactcagtttgattcatccgctgtaaaccctagaaag
ccccccaaatcttctctttcacgccagcttcttctccttgaagattcctccacctcttca
tcctggacccaatcacagagaccccaaaagcagacccattccagcattggagtcaaagat
gagaaagaagaggaagaagaagagaagcccctgacgtttgggcggtcaaagttggagtct
tttgttcttgatcacaccgggccttatgagcctttggttctgtctcctcccggagaaaca
ccactagtacaggtaccagcatctattaattgtagacttctggagcatcaaagagtggga
gttaaatttttgtatggtttatactggaacaaccatggaggtgttctaggagatgacatg
ggactaggaaagacgatccaaaccattgctttcttagcagctgtgtatgggaaagatgca
gacgtcactgattcaacatcgatctcgggggatcttgaaaggaagggccctgtactagtt
gtctgtcctacttctgtgattcataactgggagaatgagttttcgaaatgggcaactttt
agcgtttatgttcatcatggaccgaaccgggaactgataattgagaaactagaaaggtac
ggagttgagataacaataacgagttttgatacgtacagaatccatggaagcattttatct
gatgtccagtgggagattgtgattgttgatgaggcacaccggcttaagaatgacaagtct
aaactctatcaagcttgtttagaaattaaaactaagaaacgctacgggctcacggggacc
ataatgcagaacaaaattatggaattgttcaatctattcgactgggtggtgcctggttgt
ttgggtacacgtgaacacttccgcgagttctatgaggatccccttaagcatggccagaga
tcaacggcttcaaatcgacttgtcgaggttgctgatgagagaaaacagcacttggtatca
gttttgcagacgtatttgttgagaaggacaaaggaggagaccatcggacatcttatgctc
gggaaggaagacaacgttgtatgttgtgccatgagtgcattgcaaaagcgagtttaccag
aggattctacagttacccgatatccagtgccttatcaataaggacaacccttgtagttgc
ggaagtcgtctcaagcaagttgaatgttgcaaaaggattgttccagatggcattatctgg
ccataccttcatagagacaatcccgatggttgtgattcgtgccctttttgccttgtactt
ccgtgcattgtcaagctccaacaggtgagcaatcacttagagctcatcaaacccaatcca
aaggatgatccagacaagcaaagaaaggatgcagaatttgcggctgctgtatttggctct
gatatcgatttggtgggtggcaatactcagaacgagagttttatgggcttgagtgatgtt
aaacattgcgggaaaatgagagctttggaaaaacttatgttcacttggatttcacagggt
gacaagattcttcttttcagttattctgtgaggatgctggatatactcgaaaaatttctt
atacgcaaaggatattgtttctcgagactcgatggctccactccaacctgctcgcgtcag
tctcttgtagatgacttcaactcgagtccaagcaaacaggtgtttctcatatcaacaaga
gctggcggccttggactcaacctcgttagtgcgaattgcgtagtaatatttgatccaaac
tggaaccccgctcaggatttgcaggcccaggatagatcattccgatttgggcagaagagg
catgttgttgtttttcgccttcttgctgctggttctctcgaagagctcgtttactctaga
caggtgtataaacagcagctatccaatatcgctgtttctggcaagatggagaagcggtac
tttgaaggcgtgcaggactgtaaagagttccaaggcgagctgtttggaatctgcaatctt
ttccgggatctgtctgataagctttttacaagtgatattattgaattacaagagaataaa
ggcaaggaagacggtggaagccttaatctgagtgagcttgggatgcattttctccccgag
aaatcgtcttcactgacatccaaatgccaagaacctaagaaacgagatacgaaactcgag
ctagaagacctcggtattgtttatgctcatcgcaatgaagatgttgttaacctccgacct
gtggcaatcccgactagcgaggaacagaatatgcaacagcgaaaatttgctggagtttgg
agacgggaattagatgctatgaatggaaaagagaaggcgggaaattcagatgaggtggtg
aagatgcataagaaaaggcaatattgccgtatcgcccagttcatgggaatgaaggagctc
cagtttagcaaatggatactctctgcaactccagctgaaagggaaaaggtgctcaaagat
tacaagaagagaaaggagaaagttctgaatggctga

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