Iodobacter ciconiae: EJO50_06225
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Entry
EJO50_06225 CDS
T05767
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
iod
Iodobacter ciconiae
Pathway
iod01501
beta-Lactam resistance
iod01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
iod00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EJO50_06225
01503 Cationic antimicrobial peptide (CAMP) resistance
EJO50_06225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
iod03036
]
EJO50_06225
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
iod02000
]
EJO50_06225
01504 Antimicrobial resistance genes [BR:
iod01504
]
EJO50_06225
Chromosome and associated proteins [BR:
iod03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EJO50_06225
Transporters [BR:
iod02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EJO50_06225
Antimicrobial resistance genes [BR:
iod01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EJO50_06225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
CusB_dom_1
TPR_21
Motif
Other DBs
NCBI-ProteinID:
AZN36108
UniProt:
A0A3S8ZRK9
LinkDB
All DBs
Position
complement(1413418..1414575)
Genome browser
AA seq
385 aa
AA seq
DB search
MNQGTRSLPNIFRLSALTTLVLLSACGKETGLTAPSPAPVSFIEIKASDVALTKEMVGET
AGYRDVEVRSRVNGILLKRTYVEGAQVAAGQVLFEIDPEPYKATLDQAKGQLLQEASKLE
KARADRDRITPLFKENAVSRKDYDDAMSAYTSALASNQTAQASVKQAELNLGYTKVTAPF
SGTTSKLVQSEGSLISATGDSGRLTTISQLDPLYVNFSYSEQDKQALETATRSGQVTLND
SKHFTAQIKLADGSIYPQTGLINFSDNRVDPKTGTIRARAIFKNPKGDLLPGQFVRVTVA
LGKRKNTILIPERAVVQSQADHIVMTLGADNKVVPVPVKLGSVTDGKVIVESGLKVGQKV
IVDGLMKVRPGAVVNPSPASSPAAQ
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagggtactaggtctttaccaaacatatttcgcctgagtgcacttaccaccctg
gtgctacttagcgcctgtggaaaagaaactggcctgacagccccctcccctgctccggtc
agctttatcgagattaaagccagcgatgttgcccttactaaagagatggtaggtgaaaca
gcaggctatcgtgatgtagaagtacgctcgcgcgtaaatggtattctattaaaaaggacc
tatgtagagggtgcacaggttgcagccgggcaagtgttatttgaaattgatcccgagcct
tacaaagcaacgctggaccaggccaaaggccagctattgcaagaagcatccaaactggaa
aaagcccgtgcagaccgcgaccggattacgccgcttttcaaagaaaacgcagtaagccgc
aaagattatgatgatgcaatgtcagcatacacctcggctttagccagcaaccaaacagcg
caggccagcgttaaacaagctgagcttaatctgggttacaccaaagtcaccgcccctttt
tccggcaccaccagcaaactggtgcaatccgaaggcagcctgatctcggccactggcgac
tccggccgccttaccaccatcagccagcttgatccgctttatgtgaacttttcttattcc
gagcaagataagcaagctctcgaaaccgcaacacgcagcggccaggttacgctaaacgat
tcgaaacacttcacagcccagatcaagctggccgatggcagtatttacccgcaaaccggc
ctgattaacttctccgataaccgtgttgaccccaaaaccggcaccatccgtgcccgcgcc
attttcaaaaaccccaagggtgatctgcttccggggcaatttgtccgtgtcacggtagcg
ctaggcaaacgcaaaaacaccatcctgatccctgagcgcgccgtggttcagtcgcaggca
gatcacattgtgatgacactgggcgctgataacaaagttgttccggtgccagtcaagctg
ggctcggttacagacggcaaggtcattgttgaatcagggctgaaagtggggcaaaaagtg
attgtagacgggctaatgaaagttagacccggtgccgtcgtcaatccatcccccgccagc
agcccggctgctcaataa
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