Iodobacter ciconiae: EJO50_06240
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Entry
EJO50_06240 CDS
T05767
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
iod
Iodobacter ciconiae
Pathway
iod01501
beta-Lactam resistance
iod01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
iod00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EJO50_06240
01503 Cationic antimicrobial peptide (CAMP) resistance
EJO50_06240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
iod02000
]
EJO50_06240
01504 Antimicrobial resistance genes [BR:
iod01504
]
EJO50_06240
Transporters [BR:
iod02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EJO50_06240
Antimicrobial resistance genes [BR:
iod01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EJO50_06240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
MTR4_beta-barrel
Motif
Other DBs
NCBI-ProteinID:
AZN36111
UniProt:
A0A3S8ZRS6
LinkDB
All DBs
Position
1416904..1420041
Genome browser
AA seq
1045 aa
AA seq
DB search
MFARFFIDRPVFAWVIAIIIVLAGLLALKSLPISQYPEVAPPALTINATYPGASAQVMEE
TVTALIEQEMNGLENMQYMSSNSDSAGNMAITLTFKPGTDLDTASVEAQNRVKRVEARLP
SEVRQQGVQVVKSRSNFLMFVTLLSPDGSYDNVALGSYVNSSVIDSIRRVPGVGEAMLFG
SEYAMRIWLDPAKLAGFKLSASEALAAVRAQNVQLATGEIGQLPAPAGQQFTATVVTQGR
YLTAEQFGNIVLRDGKNGSQLRLKDVARVELGASDYSVLARLNGKSIAAIGIKLSPDGNA
LETAKAVKAKLTELSQFFPKGIAVEVPYDTSKFVDVSIKEVLSTLVEAIGLVFVVMYLFL
GNIRATLIPTIVVPIALLGALVGLQLFGYSINVLTMFAMVLAIGILVDDAIVVIENVERI
MSEEGLAPREATQKAMGQIIGPIIAITLVLTAVFVPMAFFSGAVGAIYRQFSVTLVLTMF
FSALMALTLTPALCATFLKPLKKGEHHGTKGFLGWFNRKFAALTLRYQGWVGTCIRKTGL
SLLFFALILVSTGWLMSRLPTSFLPDEDQGYFISVVQLPAGATHERTLEIVEQVEAHFVK
QPEVDRVIAIVGFSFFGRGQNAALAFVTLKDWKDRPLADSQVGPVVQRANMMLFRIKQAF
SFATNVPPIPELASVGGFDFRLQDRAGLGRDRLYDARNALLGMAAQNKALAGVRPDGQEP
GQQLLLDVNKVKASQLGIDMTELNNTLAISLGSAYVNDFVREGRILRVLMQATPESRLSP
DDLLKLQIKTRAGNLVPLSEIAVAKWQAGASALDRYNGLPAFKISGGPAPGKSSGEAMDA
MEAMAKQLPPGVGFEWSGTSFEERLSGSQAPFLFGLSILIVFLCLAALYESWSIPFAVLW
VVPLGIFGAVAAMTLRGLPDDVYFKVGLIAIIGLSAKNAILIIEFARDLQRQGMSAIDAT
LEACRLRFRPILMTSFAFIAGVLPLVTSSGAGAASRRAIGTGVMGGMITATVFAVFLVPV
FFVVVRRFFPEKIVVRSDEIADDHR
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctcgattttttatcgatcgccccgtatttgcctgggtgatcgcaattattatt
gttctggcgggtttgctggctttgaaaagcctgcctatttcccagtaccccgaagtggct
ccgcccgctttaacgattaatgccacttatcctggtgccagtgcgcaggtgatggaggaa
acggttaccgcactgattgagcaggaaatgaacgggctggagaacatgcagtatatgagc
tccaacagcgatagcgccggcaatatggcaattacgctgacgtttaagccgggtacagat
ttagatactgcctcggttgaagcgcaaaatcgtgtaaagcgggttgaagcacgcttgccg
agcgaagtgcgccagcagggcgtgcaggtggttaaatcccgcagtaattttctgatgttt
gtgacgctcttgtcgccagatggcagttacgacaatgtggcgctgggcagctatgttaat
tccagcgtgattgattctatccgccgtgtgccgggcgtgggtgaggcgatgttgtttggc
tccgaatacgctatgcgcatctggctggacccggccaagctggcgggttttaagctgtct
gcctccgaagcgctggctgctgtacgcgcgcaaaacgtgcaattggctaccggcgaaatc
ggccagctgcccgcacctgcaggccagcaatttacagccacggtcgtgacgcagggccgt
tatttaacggctgagcaatttggcaatatcgtgttgcgtgatggtaagaatggctcgcaa
ttacgcttaaaagacgtggccagggttgagctgggcgcatccgattacagcgtgctggcg
cgcttaaacggcaaaagtatcgcagcgatcgggattaagctgtctcctgatggcaatgct
ctggaaacggctaaagcggtgaaagccaagctgaccgagttatcgcagttttttcctaag
ggtattgcagttgaagtgccttatgacacatccaagtttgttgatgtttcaattaaggaa
gtactgagtactctggttgaggcgattggccttgtgtttgtggtgatgtatttgttcctg
ggaaatatccgcgccaccctgattccgaccattgtggtacctattgcgcttctgggggct
ctggtaggtttgcagctctttggatattcgatcaatgtgctgacgatgtttgccatggtg
ctggctattggtatcttggttgacgatgccattgtagtgatcgaaaacgtcgagcggatt
atgagcgaagaaggccttgcgccgcgcgaagccacgcaaaaagcaatggggcagattatt
ggcccgattattgccattacgctggtgctgacggccgtgtttgtgccgatggcgtttttc
tcgggtgcggtgggcgctatttatcgccagttctcggtaactttagtgctgacgatgttc
ttctcggcgctgatggctttaaccttaacgcctgccttgtgcgcgaccttccttaagcct
ttgaaaaagggcgagcatcatggcactaagggatttttaggttggtttaaccgcaaattt
gccgctttaaccctgcgctatcagggctgggtaggtacatgcatacgtaaaaccggttta
tctttactgttttttgctttgattctggtttctaccggctggctgatgtcgcgtttgccc
acgtcttttctgcctgatgaagaccagggttattttattagcgtggtgcaattgcctgca
ggggctacgcatgagcgtacgctggaaatcgttgaacaggttgaagcgcattttgtgaaa
cagcctgaggtggatcgtgtgattgcgattgtgggttttagcttctttggccgtggtcaa
aatgcagcgctggcctttgttaccttaaaagactggaaagatcgcccgctggcagatagt
caggttggcccggtggtgcagcgcgccaatatgatgttgtttcgcattaaacaggcgttc
tcatttgcaactaatgtgccgccgattcctgaactggcttcggtaggtgggtttgatttt
cgtttgcaagatcgcgccggtttaggtcgtgatcgcctttatgatgcacgcaatgcattg
ctgggcatggctgcgcaaaacaaagcgctggccggtgttcgcccggatggccaggagccg
ggtcagcagcttttactggatgtaaacaaggtaaaagccagccagctggggattgatatg
accgagctgaacaacactctggctatttcattgggttcagcctatgtgaatgactttgtg
cgtgaaggccgtatcttgcgcgttttaatgcaagctacaccggaaagcaggttatctccg
gatgatttactcaagctgcagattaaaacccgtgcgggtaatctggtgccgctgtctgaa
attgccgtagccaagtggcaggcgggtgcttctgcgctggatcgctacaacggcttgcct
gcgttcaagatttcaggcggcccggctccgggtaaaagctcgggcgaggcgatggatgcc
atggaagcgatggccaagcaattgccgccgggtgtgggctttgaatggtcgggtacgtcg
tttgaagagcggctttccggctcgcaagcgccatttctgtttggcttgtcgattctgatc
gtgttcttgtgccttgcagcgctgtacgaaagctggtcgattccgtttgctgtgttatgg
gttgtgccgctgggtatttttggtgcggttgctgccatgacattacgcggcctgccggat
gatgtgtactttaaggtggggctgattgccattatcggtttgtcagccaagaacgcgatt
ttgattattgaatttgcccgggatctgcagcgccagggtatgagtgcaattgatgccaca
ctggaagcctgccgcttacgctttcgcccgattctgatgacgtcctttgcctttattgca
ggtgtattgccgctggttaccagctccggtgcaggagctgccagtcgccgcgcgattggt
accggggtgatgggcgggatgattacagcgacggtctttgcggtgttcctggtgccggtg
ttctttgttgtcgtgcgccgcttcttcccagaaaaaattgtggtgcgaagcgacgaaatc
gccgatgaccatcgttaa
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