KEGG   Candidatus Improbicoccus pseudotrichonymphae: CfP315_0438
Entry
CfP315_0438       CDS       T09760                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
ips  Candidatus Improbicoccus pseudotrichonymphae
Pathway
ips03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ips00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CfP315_0438
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ips03400]
    CfP315_0438
Enzymes [BR:ips01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CfP315_0438
DNA repair and recombination proteins [BR:ips03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CfP315_0438
 Prokaryotic type
     CfP315_0438
SSDB
Motif
Pfam: HhH-GPD HHH HHH_5 RecR_HhH DUF763
Other DBs
NCBI-ProteinID: BED91895
UniProt: A0AA48IAH4
LinkDB
Position
complement(459778..460425)
AA seq 215 aa
MSIRQKFKHRRALVKSVLAVLLQKYPNVTCGLSFKNSFELLISARLSARCTDKCVNKVAA
TLFERFMSPEDFVSAELSDIEDIIKPCGMYKTKAKNIKDICIKLVNDFNSNIPSEFEDLL
NLPGIGRKTANLITSEVFGIPRIVTDTHVCRVTYRIGLHCETRPVKIEKVLSEIVSKEFR
SFFCHAIIALGREFCKARTFRCTVCPLVEICLKQD
NT seq 648 nt   +upstreamnt  +downstreamnt
atgtcgattcgtcaaaaattcaagcatagaagagcgcttgtaaagtctgtgttggcggtt
ttgttgcaaaagtatccgaacgtcacctgtggtttgagttttaaaaattcgttcgagttg
ttgatatctgcgcggctttcggccagatgtaccgacaaatgtgtaaacaaggttgccgca
acgctatttgagaggtttatgtcgccggaggattttgtttcggcagaattgagcgatatc
gaagatataatcaagccttgtggtatgtataaaacaaaagcaaaaaatataaaagatata
tgtataaaattagtgaatgattttaattcaaatattcccagtgaatttgaagatctgctg
aatttaccggggataggtaggaaaactgccaatttgattacttctgaggtttttgggata
ccgcggatagtaacagatacccacgtttgtagggtgacttaccgtattggtttgcattgt
gaaacaagacctgttaaaatagaaaaggtactgagtgagatagtttccaaagaattccgg
tcatttttttgtcacgcaattattgctctggggcgtgaattttgcaaggccaggaccttt
aggtgtactgtttgtccgttggttgagatttgtttaaaacaggattaa

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