Ictalurus punctatus (channel catfish): 100304476
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Entry
100304476 CDS
T04658
Symbol
tp53
Name
(RefSeq) cellular tumor antigen p53
KO
K04451
tumor protein p53
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04110
Cell cycle
ipu04115
p53 signaling pathway
ipu04137
Mitophagy - animal
ipu04210
Apoptosis
ipu04216
Ferroptosis
ipu04218
Cellular senescence
ipu04310
Wnt signaling pathway
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100304476 (tp53)
04310 Wnt signaling pathway
100304476 (tp53)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100304476 (tp53)
09143 Cell growth and death
04110 Cell cycle
100304476 (tp53)
04210 Apoptosis
100304476 (tp53)
04216 Ferroptosis
100304476 (tp53)
04115 p53 signaling pathway
100304476 (tp53)
04218 Cellular senescence
100304476 (tp53)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100304476 (tp53)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
100304476 (tp53)
03036 Chromosome and associated proteins [BR:
ipu03036
]
100304476 (tp53)
03400 DNA repair and recombination proteins [BR:
ipu03400
]
100304476 (tp53)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
p53
100304476 (tp53)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
100304476 (tp53)
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
Check point factors
Other check point factors
100304476 (tp53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P53
P53_tetramer
P53_TAD
Motif
Other DBs
NCBI-GeneID:
100304476
NCBI-ProteinID:
NP_001187005
Ensembl:
ENSIPUG00000021439
UniProt:
O93379
LinkDB
All DBs
Position
28:19974580..19983767
Genome browser
AA seq
376 aa
AA seq
DB search
MEGNGERDTMMVEPPDSQEFAELWLRNLIVRDNSLWGKEEEIPDDLQEVPCDVLLSDMLQ
PQSSSSPPTSTVPVTSDYPGLLNFTLHFQESSGTKSVTCTYSPDLNKLFCQLAKTCPVLM
AVSSSPPPGSVLRATAVYKRSEHVAEVVRRCPHHERSNDSSDGPAPPGHLLRVEGNSRAV
YQEDGNTQAHSVVVPYEPPQVGSQSTTVLYNYMCNSSCMGGMNRRPILTIITLETQDGHL
LGRRTFEVRVCACPGRDRKTEESNFKKQQEPKTSGKTLTKRSMKDPPSHPEASKKSKNSS
SDDEIYTLQVRGKERYEFLKKINDGLELSDVVPPADQEKYRQKLLSKTCRKERDGAAGEP
KRGKKRLVKEEKCDSD
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaacggagagagagacaccatgatggtggaacctccagacagccaggagttt
gcagagctctggctacggaacctcatagttcgtgataacagcttatggggaaaggaagag
gagatccctgacgacctgcaggaagtaccctgtgacgtgctgctcagcgacatgttacag
ccacagtcctcatcatctcctccgacctccaccgtccccgtcacctccgattaccccgga
ctcctcaacttcaccctgcacttccaggagtccagtggcaccaagtccgtcacctgcacg
tactctccggatctgaataaactcttctgtcagttggcgaagacgtgtcctgtgctgatg
gcggtgagttcttctcccccaccggggtccgtgctcagagccaccgccgtgtacaagaga
tcagaacacgtggccgaggtggtgcgccgctgtcctcaccacgagaggagtaacgacagc
agtgatggcccagctcctcccggtcacctgctccgtgtggaagggaattcccgagcggtt
tatcaggaggacgggaacacacaggcgcacagtgtggtggtgccctacgaacctcctcag
gtgggatcacagtcgaccactgtgctgtataactacatgtgtaacagcagctgtatgggg
gggatgaaccgccgccccatcctcaccatcatcacacttgaaacccaggatggtcacctg
ttgggcaggcgcacgtttgaagtgcgtgtgtgtgcgtgtcccgggcgtgacaggaaaaca
gaggagagcaacttcaaaaaacagcaggaacccaaaacctctggcaaaaccctcaccaag
cgcagcatgaaggatcccccttctcaccctgaggccagtaagaaatccaagaacagcagc
agtgatgatgagatttacacactgcaggtgcgtgggaaagagcgttatgagtttctgaag
aagattaatgatggtctggagctcagtgacgtggtgccccctgctgaccaggagaagtat
cgccagaaacttctgtctaaaacctgcaggaaggagagagacggagctgcaggcgagccc
aaacgagggaagaaacgactggtgaaggaggagaagtgcgactcggactga
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