Ictalurus punctatus (channel catfish): 100304646
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Entry
100304646 CDS
T04658
Symbol
tcf3a
Name
(RefSeq) transcription factor 3a
KO
K09063
transcription factor E2-alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
100304646 (tcf3a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
100304646 (tcf3a)
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GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
100304646
NCBI-ProteinID:
NP_001187135
Ensembl:
ENSIPUG00000019252
UniProt:
Q32T22
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All DBs
Position
20:19576645..19609863
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AA seq
604 aa
AA seq
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MSTAGTDKELSDLLDFSAMFPLPGANGKSRANAQAAGQFGGSGLEDRSGSGSWGSAEQNS
PSFSSRAFDNVGHYNEHESMSPSSMYSSGIGGKSDRGPYPFGTQFLPGEMSMSNPDGLSP
SGVKATSPFYGSYPANRRRPLEGVLDTPPKKIRKVPPGLPSTVYPAALSDDYNQENAGFP
SSKTGSVYPGTIYMQEGLQDPWAQSGYSSMPHHQSAPFAAINPQDRLKRQPLPLSPPSYP
HHGSEVNGGFQSAYTPPINGTDGIMGNRGSAAGSSGDEIGKALASIYPSDNNGSNFSSTP
PTPVGSPQNMAVSASQWSRGSTQSAQSPSFEGGLQALQNKMEDCLGEALHVLRNHAVGSG
LSADMHTLLSAAAGGAAGLSSLSQSFSLHGRVPGMVPNHHEESAGLTPTSALLHGQHTAA
QAPASSQSEGFSSLSGSLTRSSSTDIKREEKEDDENCSVIDKSEDEKKDGKMNRTGTSLD
NDDEDDDEDLPAEMKAEREKERRVANNARERLRVRDINEAFKELGRMCQLHLNNEKPQTK
LLILHQAVNVILSLEQQVRERNLNPKAACLKRREEEKVTGMGGDPQMQLGGGHPGLGSDG
HTHM
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgcaggaacggacaaggagctcagcgatcttctggacttcagcgctatgttt
cctcttccaggggcgaacgggaaaagcagagccaacgctcaagccgccggtcagtttgga
ggctcaggtttggaagaccggagtggatcaggctcctggggctcagcagagcagaacagt
ccatccttcagttcacgggcatttgacaatgtgggccattataatgagcatgaaagcatg
tccccttcatcgatgtacagctcaggaattggaggtaaatcagacagaggaccttacccc
tttggcacacagttcctgccaggggagatgtccatgtccaatcctgatggcctgtccccg
tccggcgtaaaagccacatcgccattctacggatcgtaccccgccaatcgtaggaggcct
ctggaaggcgtgctcgataccccgccgaagaagatcaggaaagtaccacctggtctccca
tccacggtctatccagcagctctcagtgacgactacaaccaggaaaacgcaggtttcccg
tcttcgaaaaccggcagtgtttaccctggcaccatctacatgcaagagggtctgcaggac
ccctgggctcagtcaggttattcctccatgccccaccaccagtccgccccatttgctgcc
atcaaccctcaggatcgcctgaagagacagcccctgcctctgtcccctccgtcctaccct
caccacggcagcgaagtgaacggtggcttccagtccgcatacacgcctcccatcaatgga
acagacgggatcatgggcaataggggtagcgcagcaggaagctcaggagatgaaattgga
aaagcccttgcttcaatttacccttcagacaacaacgggagcaacttctcctccactcca
cctaccccggtcggctctcctcagaacatggcagtctctgcttcccagtggtccagagga
tcaactcagtctgcacaatcacccagctttgagggaggactgcaagcgctgcagaataag
atggaggactgcctgggtgaagccttgcacgtgctgcggaaccatgcggttggttcgggg
ctgagtgcagacatgcacaccctgctgagtgctgctgctggaggagctgcaggtctgagc
tccctcagccagagcttctccctgcacggcagagtacccggtatggtgcccaaccatcac
gaggagtcggccggtctgacgcccaccagtgccctgttacacggccagcacacagctgca
caagctcccgccagctcacagtcagagggattctccagtttgtctggaagtctgactcgc
agctccagcactgatataaagagggaggagaaggaggatgacgagaactgctctgtgata
gacaagtccgaggacgagaagaaagatggcaagatgaaccgcacagggaccagtcttgac
aatgatgacgaggacgacgacgaggacttgccagcagagatgaaggcggagcgggagaaa
gaacggcgtgtggccaataacgcacgagagcgtttacgcgtgcgtgacatcaacgaggcc
ttcaaggagctcggtcgcatgtgccagctccatctgaacaatgagaaaccgcagaccaaa
ctgctgatcctgcaccaggccgttaatgttattctcagcctggagcagcaagtgcgagag
cgtaacctcaacccaaaggcggcatgtctgaagaggagagaggaggaaaaggtgaccggc
atggggggagatcctcagatgcagctgggaggaggccaccctgggctgggcagtgatggg
cacactcatatgtaa
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