Ictalurus punctatus (channel catfish): 100304978
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Entry
100304978 CDS
T04658
Symbol
cd4-1
Name
(RefSeq) CD4-1 molecule precursor
KO
K06454
T-cell surface glycoprotein CD4
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03250
Viral life cycle - HIV-1
ipu03260
Virion - Human immunodeficiency virus
ipu04060
Cytokine-cytokine receptor interaction
ipu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100304978 (cd4-1)
03260 Virion - Human immunodeficiency virus
100304978 (cd4-1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100304978 (cd4-1)
04514 Cell adhesion molecules
100304978 (cd4-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ipu04090
]
100304978 (cd4-1)
CD molecules [BR:
ipu04090
]
Proteins
100304978 (cd4-1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
V-set
V-set_CD47
TM_ErbB1
Orf78
Adeno_E3_CR1
Protocadherin
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
100304978
NCBI-ProteinID:
NP_001187155
Ensembl:
ENSIPUG00000006367
UniProt:
Q1W651
LinkDB
All DBs
Position
1:complement(11384104..11408614)
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AA seq
471 aa
AA seq
DB search
MSFLLGLLLLLAPCHSAADEPKGIFAQFGNSVTLPRRIWGIEGKIHVNWYFQDNLLISRN
PTLSASKTVHNRFSLSSDSSLIISNVEKSDFGIFKCEQHHLVETITDTYKLYEVMMSTPP
PLLVGASLDLSCEIESEGFKLVHEIKWFGPDNTLYVGSSSSNQRTLRVTKVSSIHSGKWT
CAVRYGASITLKARTDVIIVDLASSSPDPIYTSDSSINFLIPCSLSSKIPWSTVNATGVT
GGSWHFTPFKSSESSLPLLKLQLNPSPAWKFPSGTHTLLMETDLKNHELGVKISKVSINE
RGNYTCSLEFGSRTLSRSVQVEVLQVISSEGKVIYEGNTVNLTCTLGHHMTPDLEVNWIP
PYGSSLSKLSPPYTTMLSIPGVSVKDSGRWTCQLKKNATLLTSATISLKIEKAPVNIWLV
VAIIGGLLVFILIAVITVFIIRRHRQMMRYRCRKGRVCCCKNPKPKGFYKT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcttattggggttattgcttcttctggctccatgtcactcagctgcagatgaa
ccaaaggggatttttgcacagttcggaaactctgttactcttcccaggaggatatggggg
atagaaggcaaaattcatgtcaactggtacttccaggataacttactaattagtaggaat
cctacattatccgcttcaaaaacagtgcacaaccgattctctctttcatcagactcatct
cttatyatttctaatgttgaaaagtctgactttggaattttcaaatgtgaacagcatcac
cttgtggaaactattacagacacatataaactttatgaagtaatgatgtctacaccgcca
ccactgctggttggtgccagtctcgatctgtcctgtgaaattgaaagtgaaggatttaaa
cttgttcatgaaataaaatggttcgggcctgataatacattgtatgtcggatcatcttct
tcgaaccaacgcactctcagggtraccaaagtctccagcattcacagtggaaagtggacc
tgtgcagtgcggtatggtgctagcatcacattaaaggccagaacagatgtcatcattgta
gatctcgcctcctcttcaccggatcccatctatacatctgactcctccattaatttcctt
atcccytgttccttatcctcaaaaattccctggtccacagtgaatgccacaggtgtgacg
ggaggtagctggcatttcactccatttaaatcttctgaatcctcgctccctctcctcaaa
ttacaactcaatccctcccctgcctggaagttccccagtggcacacacaccttgctcatg
gagactgatttgaaaaatcatgaactcggtgtgaagatttccaaggtgtctataaatgaa
agggggaactacacctgcagtctcgagttcgggtcaagaacactcagcaggagcgtgcag
gtagaggtgctgcaagttatttcttcagaaggtaaagttatatatgagggtaacacagtg
aacttgacctgcacgctgggtcatcacatgacccctgacctggaagtgaactggatacct
ccctatggttcatctctgtcaaaactcagccctccttataccacaatgctgtctatccct
ggagtaagtgtgaaggacagcgggcgatggacatgtcaactcaaaaagaatgcaacattg
cttacatcagctacaatcagtttgaaaatagagaaagctccagtgaatatttggcttgtt
gtagctattattggtggtcttctggtcttcatcttgattgctgtaataactgtcttcatc
attcgtaggcacagacagatgatgaggtatagatgccgtaaggggagagtctgctgctgt
aagaatcccaagcccaaaggtttctacaagacctga
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