Ictalurus punctatus (channel catfish): 100305065
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Entry
100305065 CDS
T04658
Symbol
tcf3b
Name
(RefSeq) transcription factor 3b
KO
K09063
transcription factor E2-alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
100305065 (tcf3b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
100305065 (tcf3b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
E_Pc_C
Motif
Other DBs
NCBI-GeneID:
100305065
NCBI-ProteinID:
NP_001187227
Ensembl:
ENSIPUG00000001114
UniProt:
Q56R80
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All DBs
Position
10:12334290..12357346
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AA seq
667 aa
AA seq
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MNDQQGHRMAVETDKELSDLLDFSAMFAPPVANGKTRPTTLASSQFGGSGLDERSGSSPW
AAGEQGSPSFNHGRSYSEGSHYSEHDGLSSPFLSSGIGGKNERGPYPSFGAQQGFLPSDI
VMANADAMSPSGLKSGSQFYPTFSNNPRRRPPDGNIDTQPKKIRKPPGLPSSVYASTSGD
EYPRDSAGYPGSKPGPVYPGSFYMQEGLQPSSDPWASSGPLGQSGYSAMLGNSPHISQPG
SFTAINPQDRMKRQPLPLSPQNYPLHGADVNGFHSGSGTYNHTSSVNGADSIMVSRSSAT
GSSGDEIGKALASIYPSDHNSNNFPSAPSTPVGSPQGIAGASQWPRSASQTALSPSYEGG
LHALQNKMEDHLEEAIHVLRSHAVGQGPGSSLGGAHSDVHSLLSAVSASIHNGALGSLGQ
GFPGAGLALGSRHPAMGGSHHDDPACLPPSSSSLLPTSHASGTPQPAGAPEGFTSLPGGV
ATHSSNSSDIKREDKEDDENSSIADKSEEEKKDPKVSRNRTRKEAFSLQIHSSVSDQGED
KDDDEDDEDLPAEVKLEREKERRVANNARERLRVRDINEAFKELGRMCQLHLSTDKPQTK
LLILHQAVNVILNLEQQVRERNLNPKAACLKRREEEKVSGVVGDSPMQLPGPHPALGGDG
HSSVGHI
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcagcagggccacagaatggcggtcgaaacagataaggaactcagcgacctc
ttggattttagtgcgatgtttgcgccccctgtggccaacgggaagactcgaccaaccacg
cttgccagcagtcagtttggtggctcgggattggatgagcgcagcggttccagtccctgg
gctgctggggagcagggcagcccttcattcaatcatggacggagttacagcgaggggtca
cactacagtgagcatgatgggctttcttcaccattcctcagctctgggattggcggaaag
aatgaaaggggaccttatccttcatttggtgcccagcaagggttcctgccttcagacatt
gtgatggccaatgctgatgccatgtctccctcaggcctgaagtctggttctcagttttac
ccaaccttctccaacaacccccggagacgcccaccagatggaaacattgacacccaacca
aaaaagattaggaagccaccaggactgccatcttctgtgtatgcctccacgtccggtgat
gagtatcctcgggacagcgctggatatccaggctccaaacccggtcctgtgtaccccggc
tccttctacatgcaagagggtctgcagccttcctctgacccctgggcgtcttctgggcct
ctgggccagtcaggctattcggccatgctgggcaactcgccccacatcagccagccaggc
tccttcactgccatcaatccacaggacaggatgaagcgccagccgctccctctctcccca
caaaactaccctctccacggcgctgacgtcaatggcttccattcaggctcgggaacatac
aaccacacatcgtccgttaatggtgcagacagcattatggtcagtagaagttcagccaca
ggcagctcaggtgatgagattggaaaagccctagcctcgatctacccttcagaccacaac
agtaacaatttcccctccgcaccctccacgccagttggctcgccccagggcattgcaggt
gcttctcagtggccaagatctgctagccaaaccgccctctcacctagctatgaaggtgga
ctacatgcacttcagaataaaatggaggaccatctagaggaggccatccatgtgctgcgc
agtcatgcagtggggcagggcccaggctcaagtcttggtggagcccactcagacgttcac
agtctgctgagtgctgtgtccgcgtctattcataatggagccctgggaagccttggccag
ggcttcccgggtgctgggctggctctgggcagcagacatcctgccatgggtggaagtcac
catgatgaccctgcgtgcctccctcccagcagcagcagcctattaccaacgtcccacgcc
tcgggcaccccacagcctgcaggagcaccagagggcttcactagtttgccaggaggcgta
gccacgcactcctcaaacagcagcgatattaagagggaagacaaagaagatgatgagaac
tcatccattgcagataagtctgaagaggaaaagaaggaccccaaagtgtctcgcaacaga
acaagaaaggaggcgttttccctccagatccattcaagtgtttcagaccagggagaagat
aaagatgatgatgaggatgatgaagatttgcctgccgaggtgaagctggaacgggaaaaa
gagcggcgtgtggccaacaacgcacgagaaagattgcgtgtgcgagacatcaacgaggct
tttaaagagctgggccgcatgtgtcaactgcacctgagcacggacaaaccgcagaccaaa
ctgctcatccttcaccaggccgtcaacgtcatcctcaatctggagcagcaagtgcgggag
cgtaatctgaacccgaaggcagcatgtctgaaacggcgggaggaagaaaaagtgtctggt
gtggtgggtgactctccaatgcagttgcctggacctcatcctgctctgggaggagatgga
cacagttctgttgggcatatatga
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