Ictalurus punctatus (channel catfish): 100305073
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Entry
100305073 CDS
T04658
Symbol
ifng1
Name
(RefSeq) interferon gamma 1 isoform 1 precursor
KO
K04687
interferon gamma
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03050
Proteasome
ipu04060
Cytokine-cytokine receptor interaction
ipu04217
Necroptosis
ipu04350
TGF-beta signaling pathway
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
100305073 (ifng1)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100305073 (ifng1)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100305073 (ifng1)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
100305073 (ifng1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100305073 (ifng1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ipu03051
]
100305073 (ifng1)
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ipu04052
]
100305073 (ifng1)
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
100305073 (ifng1)
Proteasome [BR:
ipu03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
100305073 (ifng1)
Cytokines and neuropeptides [BR:
ipu04052
]
Cytokines
Interferons
100305073 (ifng1)
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Cytokines
100305073 (ifng1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFN-gamma
TraB_PrgY_gumN
DUF2207_C
Int_N
DUF7370
NDUFB11
DUF7342
ZYG-11_interact
Motif
Other DBs
NCBI-GeneID:
100305073
NCBI-ProteinID:
NP_001187231
Ensembl:
ENSIPUG00000015791
UniProt:
Q45NA7
LinkDB
All DBs
Position
19:17352865..17354836
Genome browser
AA seq
178 aa
AA seq
DB search
MTLFWRICFVFFGMMAYSEAFLPKNIKESIDHLNNHYVRKNPNPGKLYDGHSLFLDKLTK
QKFEESEQKLLMTIILDAYNKIFTKMENETQDETLKNHLHEVKDQMNKLKEHYFSGKHAD
IKKYVTELLDLKENDPRIQSKAIFELKAVYNKATNLGRMSAENPRRRRQAKSSKKQHS
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgactctgttttggagaatatgttttgtcttttttggaatgatggcgtactctgaggcc
ttcctcccgaagaacatcaaggagtctattgaccatctgaataatcattatgtaagaaaa
aatcccaaccctggcaaattgtacgatggtcattctctcttcctagacaagctaacaaaa
caaaagtttgaggagagtgaacagaagctcctgatgactattattctcgatgcatacaac
aaaattttcaccaagatggagaatgagactcaggatgaaacgctgaagaatcacttgcac
gaagtgaaagaccaaatgaacaagctgaaagaacactacttctccggcaaacatgcagac
atcaagaaatatgtcactgagctgctggaccttaaggaaaatgacccacggatccagagc
aaagcaatatttgagctgaaggccgtctacaataaggcaacgaacctggggcgcatgtca
gcagaaaacccccggagacgacgtcaagctaaaagctccaaaaagcagcattcataa
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integrated database retrieval system
