KEGG   Ictalurus punctatus (channel catfish): 100528155
Entry
100528155         CDS       T04658                                 
Symbol
ran
Name
(RefSeq) GTP-binding nuclear protein Ran
  KO
K07936  GTP-binding nuclear protein Ran
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03008  Ribosome biogenesis in eukaryotes
ipu03013  Nucleocytoplasmic transport
ipu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100528155 (ran)
   03008 Ribosome biogenesis in eukaryotes
    100528155 (ran)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100528155 (ran)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ipu03019]
    100528155 (ran)
   03009 Ribosome biogenesis [BR:ipu03009]
    100528155 (ran)
   03016 Transfer RNA biogenesis [BR:ipu03016]
    100528155 (ran)
   03036 Chromosome and associated proteins [BR:ipu03036]
    100528155 (ran)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ipu04147]
    100528155 (ran)
   04031 GTP-binding proteins [BR:ipu04031]
    100528155 (ran)
Messenger RNA biogenesis [BR:ipu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     100528155 (ran)
Ribosome biogenesis [BR:ipu03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    100528155 (ran)
  Pre-60S particles
    100528155 (ran)
Transfer RNA biogenesis [BR:ipu03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    100528155 (ran)
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     100528155 (ran)
   Spindle formation proteins
    100528155 (ran)
Exosome [BR:ipu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100528155 (ran)
GTP-binding proteins [BR:ipu04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    100528155 (ran)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU ArgoMid
Other DBs
NCBI-GeneID: 100528155
NCBI-ProteinID: NP_001187354
Ensembl: ENSIPUG00000015737
UniProt: E3TDZ9
LinkDB
Position
8:complement(25125298..25128643)
AA seq 215 aa
MAENDPQVQFKLVLVGDGGTRKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKY
NVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCG
NKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVEMPA
LAPPEIAMDPSLAAQYEHDLKVASETALPDEDDDL
NT seq 648 nt   +upstreamnt  +downstreamnt
atggcagagaacgacccacaagttcagtttaagctggtcctcgtaggagatggaggcacg
aggaagactactttcgtgaagaggcacttgacaggagagtttgaaaagaaatatgttgcg
actctgggtgtcgaagttcatcccttggtctttcacactaacagaggcgctatcaaatac
aacgtgtgggacacagccggacaggagaagttcggaggcttgcgagacggatactatatc
caagctcagtgtgcgatcatcatgttcgacgtaacctctcgagtgacttataagaatgtt
cccaactggcatcgtgacctggtgcgtgtgtgcgagaacattcccatagtgctgtgcggc
aacaaagtggacatcaaggacaggaaggtgaaagcgaagagcatcgtgttccaccgcaag
aagaacctacagtactatgacatctccgccaagagtaattataacttcgagaagccgttc
ttgtggcttgcgcgaaagctgattggagatcccaacttggagtttgtggagatgcctgcc
ctcgccccacccgaaatcgctatggacccatcacttgctgcacagtacgagcatgaccta
aaagtggcatcagaaacagctctgccagatgaggacgacgacctctaa

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