Ictalurus punctatus (channel catfish): 100528155
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Entry
100528155 CDS
T04658
Symbol
ran
Name
(RefSeq) GTP-binding nuclear protein Ran
KO
K07936
GTP-binding nuclear protein Ran
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03008
Ribosome biogenesis in eukaryotes
ipu03013
Nucleocytoplasmic transport
ipu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100528155 (ran)
03008 Ribosome biogenesis in eukaryotes
100528155 (ran)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100528155 (ran)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
100528155 (ran)
03009 Ribosome biogenesis [BR:
ipu03009
]
100528155 (ran)
03016 Transfer RNA biogenesis [BR:
ipu03016
]
100528155 (ran)
03036 Chromosome and associated proteins [BR:
ipu03036
]
100528155 (ran)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
100528155 (ran)
04031 GTP-binding proteins [BR:
ipu04031
]
100528155 (ran)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100528155 (ran)
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
100528155 (ran)
Pre-60S particles
100528155 (ran)
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
100528155 (ran)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100528155 (ran)
Spindle formation proteins
100528155 (ran)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100528155 (ran)
GTP-binding proteins [BR:
ipu04031
]
Small (monomeric) G-proteins
Ran Family
Ran
100528155 (ran)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
ArgoMid
Motif
Other DBs
NCBI-GeneID:
100528155
NCBI-ProteinID:
NP_001187354
Ensembl:
ENSIPUG00000015737
UniProt:
E3TDZ9
LinkDB
All DBs
Position
8:complement(25125298..25128643)
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AA seq
215 aa
AA seq
DB search
MAENDPQVQFKLVLVGDGGTRKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKY
NVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCG
NKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVEMPA
LAPPEIAMDPSLAAQYEHDLKVASETALPDEDDDL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaacgacccacaagttcagtttaagctggtcctcgtaggagatggaggcacg
aggaagactactttcgtgaagaggcacttgacaggagagtttgaaaagaaatatgttgcg
actctgggtgtcgaagttcatcccttggtctttcacactaacagaggcgctatcaaatac
aacgtgtgggacacagccggacaggagaagttcggaggcttgcgagacggatactatatc
caagctcagtgtgcgatcatcatgttcgacgtaacctctcgagtgacttataagaatgtt
cccaactggcatcgtgacctggtgcgtgtgtgcgagaacattcccatagtgctgtgcggc
aacaaagtggacatcaaggacaggaaggtgaaagcgaagagcatcgtgttccaccgcaag
aagaacctacagtactatgacatctccgccaagagtaattataacttcgagaagccgttc
ttgtggcttgcgcgaaagctgattggagatcccaacttggagtttgtggagatgcctgcc
ctcgccccacccgaaatcgctatggacccatcacttgctgcacagtacgagcatgaccta
aaagtggcatcagaaacagctctgccagatgaggacgacgacctctaa
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