Ictalurus punctatus (channel catfish): 108254819
Help
Entry
108254819 CDS
T04658
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108254819 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ipu01007
]
108254819 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108254819 (iars1)
Enzymes [BR:
ipu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
108254819 (iars1)
Amino acid related enzymes [BR:
ipu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108254819 (iars1)
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108254819 (iars1)
Prokaryotic type
Other AARSs
108254819 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
Plectin_PPL
Motif
Other DBs
NCBI-GeneID:
108254819
NCBI-ProteinID:
XP_017305645
Ensembl:
ENSIPUG00000012333
UniProt:
A0A2D0PKR1
LinkDB
All DBs
Position
21:2914191..2995090
Genome browser
AA seq
1266 aa
AA seq
DB search
MVEPVPESIHFPSAEERILQLWTENDCFQECLKQSKNRPRYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKSLGIKGPEDVAKMGIAEYNKQC
RSIVMRYAKEWEVSVTRMGRWIDFKNDYKTLYPWFMETVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVIVNFPLLEDESVCMIAWTTTPWTLPSNLALCVNP
ELIYVKVKDNTTDKVYIMMEARLGALFKSESEYAILEKFPGKSLKGKQYKPLFEYFIKCK
ENGAFSIVLDNYVREEEGTGVVHQAPYFGADDYRVCMEYNIIQRDSAPICPVDSSGCFTP
EVTHFSGQYVKDADKNIIKWLKEKGRLVNVSSFKHNYPFCWRSDTPLIYKAVPSWFVRVE
NMVDKLLENNDKCYWVPEFVGEKRFGNWLRDARDWAISRNRYWGTPIPMWVSDDFEEVVC
VGSIAELEQLTGVKVADLHRETVDGLTIPSRRGKGELRRIPEVFDCWFESGSMPYAQVHY
PFENRREFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPGVIVQNYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLVQNVLRLHKEEDMTFLYNENTAKLSDNIMDKWIQSFTQSLIQFFKAEMDAYRLYTVV
PKLVKFVDMLTNWYVRTNRRRLKGESGSEDCVWALETLFSVLFSMCRLMAPFTPFITELM
YQNLRHLIDPASVEEKDTASIHYMMLPHVRESLIDKHIESAVCQMQSVIELGRVIRDRKT
LPVKYPLREVVVIHQDPEALEDIRSLQKYILEELNVRQLTLSADKDKYAIRLRAEPDHMV
LGKRLKGAFKPVMAAIKELKSEQLEAFQKTGSIIVDGHELHEEDLRLMYTFDQKSGTAAQ
YEAHSDGQLLVLLDITPDQSMVDEGVAREVINRIQKLRKKGHLVPSDEITVYYSSEPAGD
YLDKVIQAHSDFIFATTKAPLKLYPVPKTASVIVQEKTQLKGSDLDLTIIKGAEVSRAPF
TGPACAYVNLRVNLNNKQQEGMVLLENPKGDNKLDVEKLKMVCRTIFNLNNTPLAIFNEA
TELKNSSDLLALSGKTLCVTSGARPTEKTSSETLLCPYINLQLINACPAECQRGDVGTLL
LANPAGQNNLQPTALITEVAKVFGLRGRKIKLCMDEELKEEFTETSLKSLNTKTLYVQVL
PTTAEA
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggtggaacccgtgcccgagtcaatccactttccctcagcggaggagcgcattctccaa
ttgtggaccgaaaacgactgcttccaggagtgcttgaaacaatccaaaaacaggcccagg
tacacattctacgatggcccgccctttgctactggtctcccgcattacggccacattctg
gctggcacgataaaggatatcgtcacaaggttcgctcaccagagcggtttccacgtggac
aggaggtttggctgggattgccacggcttgcctgtggaatatgagattgataagtcactg
ggaattaaaggaccagaggatgttgctaagatggggattgcagagtacaacaagcagtgc
aggagtatcgtgatgagatatgccaaggagtgggaggtttcagtgacgaggatgggccgt
tggatcgactttaagaacgattacaagaccctctacccatggttcatggagactgtatgg
tgggtgtttaagcagctgtatgataaaggtctggtgtacagaggagtgaaggtcatgccg
ttctccacagcctgtaacacgccactctccaactttgaatcccaccagaactacaaggac
gttcaggatccatccgtcattgtgaacttccctttgctggaggacgagagcgtgtgcatg
atcgcatggaccaccacaccgtggactctgccgagcaacctggcactgtgcgtaaaccct
gagctcatctacgtcaaggtgaaagacaataccacggataaagtgtacatcatgatggag
gccaggctcggggcgctgttcaaatctgagagtgaatacgccatcctggaaaagtttcct
ggcaagagtctgaagggaaaacaatacaaacctctttttgaatacttcatcaagtgtaaa
gagaacggagccttttctatcgtgctggataactacgtccgtgaggaggagggtacagga
gtggttcatcaggcgccctactttggagctgacgattaccgtgtgtgtatggagtataat
atcatccagcgcgactcggcacccatctgccctgtggattcgtcaggctgtttcacccca
gaggtcacacacttctccggccagtacgtgaaggacgcagataaaaacatcatcaagtgg
ctgaaagagaaggggcggctggtcaacgtgagctcttttaaacacaactaccctttctgc
tggaggtctgacacaccgctgatctacaaggctgtgcccagctggtttgtgagagtcgaa
aacatggtggataaacttctggaaaacaatgacaagtgttactgggttcccgagtttgtg
ggagagaagcgttttggcaactggctgagagatgctcgagactgggccatctcccgtaac
cgttactgggggacgccaattcctatgtgggtcagcgatgactttgaggaggtggtgtgt
gtgggctccattgctgagctggagcagttgacgggagtgaaggttgcagatctgcacaga
gaaaccgtggacggtttaactatcccgtcccgccgtgggaaaggcgagctcaggaggatc
ccggaggtcttcgactgctggttcgagagcggaagcatgccctacgctcaagtgcactac
ccttttgagaacaggcgcgagtttgaggacacttttcctgcagacttcatcgcagagggg
atcgaccagaccagaggatggttctacacgttgctcgtgctctcgaccgccctcttcggt
aagcctccgttcaagaacgtgatcgtcaacggcctggtcctcgcaagcgacggccagaag
atgagcaaacgaaagaagaactacccggaccccggtgtgatcgtgcagaactacggcgcc
gacgcgcttaggctgtacctaatcaactctccggtggtccgagcagaaaacctgcgcttt
aaagaagagggagtgagggacgtactcaaagacgttttcctgccctggtacaacgcttac
cgcttcctcgtgcaaaatgtcctgaggcttcataaggaagaggacatgacgttcctgtat
aatgagaacacggccaagctgagcgacaacatcatggacaaatggatccagtccttcacg
cagtcgctcattcagttctttaaagctgagatggatgcctacaggttgtacaccgttgtg
ccgaagctggtgaagtttgtggacatgctgactaattggtacgtgaggacgaaccgcagg
cgtctgaagggtgagagcggttctgaagactgtgtctgggctctggagaccctctttagt
gtgctgttctccatgtgcagactgatggctcccttcacgccgttcatcactgagctgatg
taccaaaacctgcgtcacctgatcgaccccgcatccgtagaggagaaagacacagccagc
attcactacatgatgctccctcacgtcagggagtcgctgatcgacaagcacatcgagagc
gccgtatgccaaatgcagtccgtcatcgagctgggtcgagtgatccgagacaggaaaact
ctccctgtcaagtatcccctcagggaggtggtggtcatccatcaggaccccgaggctctc
gaagacattcggtccctgcagaaatacatcctagaggagctgaatgtgcgccagctcacc
ctctcggcagataaggataaatacgccatccggctgcgggccgagcccgaccacatggtg
ctcggaaagaggctgaaaggagcgttcaaacccgtcatggccgccatcaaggaactgaaa
agcgaacagctagaggccttccaaaaaacaggctccatcatagtggacggacacgagctg
cacgaggaagatttgcggctgatgtacaccttcgatcagaaatcgggcacggcagcacaa
tatgaagcccattcagatgggcagctgttggttctcttagacatcactcctgatcagtca
atggtggatgaaggcgtggctcgagaagttataaaccgcattcagaaactgcgcaagaag
ggtcatctggtcccatccgacgagatcacagtgtactacagctccgagcctgcaggtgat
tacctagacaaagtgatccaggctcattcagacttcatctttgccactacgaaggctcca
ctaaagctttatcctgttcccaaaaccgccagcgtgatcgtccaagagaaaactcagttg
aagggttccgacctggatttgaccatcattaagggagcagaagtctccagagcacccttc
actggccctgcatgcgcttacgtcaacctccgagtcaatctcaacaataaacaacaagaa
ggaatggttctgttggaaaatcccaagggagacaacaaactggacgtagagaagcttaag
atggtttgccgcaccattttcaacctcaacaacactcctttggccattttcaacgaggct
actgagctgaagaacagcagtgatctactggctctgagtgggaagactctgtgtgtgacg
tcaggagctcgtcctacggaaaaaaccagctccgagactctgctgtgtccttacatcaac
ctacaactcatcaatgcatgtcctgcagagtgccagaggggtgacgttggcacgttgctg
ctcgctaatcctgcgggtcaaaataacctccagcccacggccctgatcaccgaagtcgct
aaagtgttcggtctccgaggaaggaagattaaactctgtatggacgaggagctcaaagaa
gaattcaccgagacgtctctgaagagtctgaacacgaagactttgtatgtacaagttctt
ccaacaaccgctgaagcatag
DBGET
integrated database retrieval system
