Ictalurus punctatus (channel catfish): 108256487
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Entry
108256487 CDS
T04658
Name
(RefSeq) vascular endothelial growth factor receptor 1 isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04020
Calcium signaling pathway
ipu04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108256487
04020 Calcium signaling pathway
108256487
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108256487
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ipu01001
]
108256487
Enzymes [BR:
ipu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
108256487
Protein kinases [BR:
ipu01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
108256487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
VEGFR-1-like_Ig-like
ig
Ig_2
Ig_VEGFR-1-like_5th
V-set
VEGFR1-3_N_Ig-like
VEGFR-2_TMD
Ig_4
C1-set
Izumo-Ig
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
108256487
NCBI-ProteinID:
XP_017308898
Ensembl:
ENSIPUG00000009753
UniProt:
A0A2D0PQN9
LinkDB
All DBs
Position
23:4749183..4779899
Genome browser
AA seq
1282 aa
AA seq
DB search
MLEIFLVMLCGLTSRVVTKDADNKGRFSSPVLNVTERQIILEKNQMLQLNCRGRWELEWV
YPTGVSKSHPSAHVEETRCGKRKNLYCSSLILSPALAQHTGSYRCRYSHKQHKHTSVYIF
ITDSRQPFVKVQKEIPDVVYMKEGQDLVFPCRVTNPETKVSLIKFPDRKIGTDQRNIIWN
NRKGFVIRSPTYFYIGLFSCETIINGTKYTNKFLTYRPVNKIQKVYLNSTGLEQALQGER
LALNCTVIAEFNSRVNINWSYPGKANSTVSIIRRITQSRTNVVFYSILTVHKLHKADKGM
YTCHVTSGPAKREVNTSVIVYDKPFIKLKHRDGPLVQVNAGQKSFRLSPKLRAFPEPEVI
WWKDGKVAAEQCSRYHVEGNSLVIRDVAEEDAGDYTILTRIQQFGLHQNLTLSLVVNVKP
QIAEKAVAVRDTATMPRSSRQVFRCTVHGIPPPQIQWLWHRCPTKGLCEELVSSSWTAVR
EGAAVTSTYNPVLSVTHVQEALQGKNKTIGILTVGKALISGVYRCVASNSVGTDELDIRF
YVTDVQGGFSVSGESEEGPREGRDYHLSCVANKHLYSNMSWHRVTGSSAGMVEGPPLVGE
LTEGEYSLTLRLTLTNLTAQDSGTYRCSATHLVTMQDSHQDILMTVAVLEAPVLLQNLSD
CSVNISNSVTLQCPASGVPRPLVTWYKDRRKLKQVSGIMLEPEDGTLHIDRIAVEDEGLY
TCQATNERGSVESSAYVSVENSESFSLEIPTLACTCVVATLFWLLLTLLIRKLRQPNSAN
GKTEYLPIILHQGEGPLDEHCDRLQYDAEKWEFPQERLQLEKPLGRGAFGKVMQASAFGI
GNSTGCTTVAVKMLKEGATPSEHKALMTELKILNHIGHHLNVVNLLGACTRPGGPLMVIV
EYCKYGNLSSYLRSKRDVFMLNRVNGEEERGQQDECKSCVESQSSQKVSSEIEGERREEN
EEDNGSVSCSNTPLHLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSDNNVVKICD
FGLARDLYKDPDYVRKGDARLPLKWMSPESIFDKVFTTQSDVWSYGVLLWEIFSLGASPY
PGLNIDEEFCHRLKQGTRMRAPEYSTPEIYNTMLVCWERNPSDRPAFTELVGTLGDLLQA
RVQQDGKDYIPLNTFLSGESGAEYLDYRDTQQGNPSYINTRIDTVSTFEEDLNREVPEDS
QSDSGMVLPSEEFIQLKWTDKFKTKNITRFFLKSQHQERMLASSALRCVSGVPCGCGEND
DTAVPCGAPPPDYNTALLYPSL
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgttggagatctttttagtgatgctgtgtggactgacgagccgagtagtgaccaaagat
gcagacaataaaggaaggttcagctctccagtactgaatgtaactgaacgacagatcatc
ctggagaagaaccagatgctgcagctgaactgcagggggcgatgggagctggagtgggtg
taccccacgggtgtgagcaagagccacccaagtgctcatgtagaagagactcgttgtggc
aagcggaaaaacctgtactgcagcagccttatcctcagccctgctttagcccagcataca
ggctcctaccgctgccgctattcccacaagcagcacaaacacacctctgtctacatcttc
atcacagatagccggcagccctttgtaaaggtgcagaaagagatcccagacgtggtctac
atgaaggaaggacaagacttagtgttcccctgcagggtcactaaccctgaaacaaaagtc
tcattgatcaaatttcctgaccgaaaaattggcaccgatcagaggaacatcatttggaat
aacagaaagggctttgttatccgaagccccacgtacttctacattggccttttttcctgc
gaaaccatcatcaatggaacaaaatacaccaacaagttcttgacttacagaccagtgaat
aagatccaaaaggtatatctgaacagcactggcttggaacaggctctgcaaggcgagcgg
ctggccttaaactgtaccgttatagcggagtttaactcgagagtgaacatcaactggagt
taccctggaaaggccaatagtacggtctcaatcattcggcgtataacacagagcaggacc
aacgtggtgttctacagcatcctcactgtccataaactgcacaaggctgataaaggaatg
tacacgtgccatgtaacaagtggaccagcaaagcgggaagtcaacacctcagttatagtt
tatgataagcccttcatcaagttaaagcatagagatggtccactggtacaggtgaatgca
gggcagaaatcctttcgcctgtcccccaaattacgggctttccctgaacctgaagtcatc
tggtggaaagatgggaaggtggcggctgagcagtgttcacgttaccacgtagaaggcaat
tccctggtgattcgagacgttgcagaggaggatgcaggggactataccatcctcactcga
atccaacagtttggccttcatcagaacctcacactctcacttgttgtgaacgttaagcct
cagattgcagagaaagctgtggcagtgcgggacacagcaaccatgccacggtccagcagg
caagtcttccgctgcaccgttcacggcatcccgccacctcaaatccaatggctctggcat
cgctgccctactaaaggcttatgcgaggagctggtttcctcgtcctggactgcagtgaga
gagggggcagcggtcacgtccacctacaatcccgtactgagcgtcacacacgtacaggaa
gcgttgcagggaaagaataagaccattggtattttaacagttggcaaggcattaatatct
ggcgtctatcgctgtgtggcttccaactcagtgggtacagatgaactggacatccgcttc
tatgttacagacgtccagggaggcttcagcgtctctggggagtccgaggaagggccaaga
gagggcagagactatcacctgtcctgtgtagccaataaacacctgtattccaacatgtca
tggcacagagtgacaggcagctcagcaggtatggtggagggtccacctctggttggagag
ctgacggagggagaatactcactcactctgcgcttgacgttgacgaacctgacagcgcaa
gactctgggacgtaccgctgctctgccacacacctggtcacgatgcaggactcccatcag
gatatactcatgacagttgcagttctggaggctccagtgttgctgcagaacctcagcgat
tgcagtgtgaacatcagcaactcggtgactcttcagtgccccgccagtggagtgccacga
cctctcgtcacgtggtacaaggaccggaggaagctcaagcaggtgtctggcatcatgctg
gagccagaagatggcactctccacattgaccgcatcgctgttgaggacgagggcttgtat
acatgtcaggccaccaacgagagaggatctgtggagagctcggcttacgtttcagtcgaa
aattctgagtctttctctctggagatccccacattagcctgcacttgtgtggtggccact
ctcttctggctgctcctaacgctgctcattcgcaagctcagacagccaaattcagcaaat
ggcaagacagaatacctgccaatcatcctgcaccagggggaggggcctctagatgaacac
tgcgataggctacagtatgatgccgaaaagtgggagttcccacaggagcgtcttcagctg
gaaaagccactgggacgaggggcatttggcaaagtgatgcaggcgtccgcctttggcatc
ggcaactcaaccggctgcaccaccgtggctgtcaaaatgctcaaagagggagccacgcca
agcgagcacaaagcactaatgacagagctgaaaatcctcaaccatatcggacatcacctc
aacgtagttaatctccttggtgcctgcaccagaccaggagggcctcttatggtcatagtg
gaatactgcaagtatggaaacttgtcctcatacctaaggagcaagagggacgtgttcatg
ctgaacagggtgaatggagaagaggaaaggggacagcaagatgagtgtaagagctgtgtg
gagagccagagcagtcagaaagtcagctctgagatagagggtgagagaagagaggaaaat
gaggaagacaatggttctgtctcgtgctcgaacactcctctacacttagaggacctgatt
tcctacagcttccaggtggccagaggcatggagttccttgcctcacgcaagtgtatacac
cgagaccttgctgcccgaaacatcctgctatctgacaacaacgtggtgaaaatctgtgac
tttgggctggcccgagacctttacaaagatcctgattatgtgcgcaaaggagatgctcgc
ttaccgctgaaatggatgtctccggaatcgatcttcgacaaggtcttcaccactcagagt
gatgtgtggtcttacggtgttctgctctgggaaatcttctcacttggggcgtccccgtat
ccaggactcaacattgatgaggagttttgccacagactgaaacaaggaactcgaatgcgt
gccccagaatacagcacccctgaaatctacaacactatgctggtgtgctgggagagaaac
ccgtcagacagacccgccttcactgagctggttggaacgctaggagaccttctccaggct
cgtgtgcaacaggatgggaaggattacatccccttgaacacgtttttgtcaggagagagt
ggtgcagagtatctggattacagagacacacagcaaggaaacccgagctacatcaatacc
agaatcgatactgtctccacgtttgaagaggacctgaacagagaagtcccagaagattcc
cagtctgacagtggcatggttctcccatctgaagagttcatccagctgaaatggactgac
aagttcaaaactaaaaacataaccaggttcttcttgaaaagccagcaccaggagagaatg
ttagccagttcagcactccgctgtgtgagcggcgtcccctgtggctgcggagagaacgac
gacactgccgtcccctgtggtgcacctcctcctgactacaacactgctttgctctaccct
tctctttaa
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integrated database retrieval system
