Ictalurus punctatus (channel catfish): 108256487
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Entry
108256487 CDS
T04658
Name
(RefSeq) vascular endothelial growth factor receptor 1 isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04020
Calcium signaling pathway
ipu04510
Focal adhesion
ipu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108256487
04020 Calcium signaling pathway
108256487
09133 Signaling molecules and interaction
04518 Integrin signaling
108256487
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108256487
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ipu01001
]
108256487
Enzymes [BR:
ipu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
108256487
Protein kinases [BR:
ipu01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
108256487
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
VEGFR1-3_N_Ig-like
Ig_3
I-set
Ig_VEGFR-1-like_5th
Pkinase
VEGFR-1-like_Ig-like
ig
Ig_2
V-set
VEGFR-2_TMD
Ig_PDGFR_d4
Ig_4
C1-set
Izumo-Ig
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
108256487
NCBI-ProteinID:
XP_017308898
Ensembl:
ENSIPUG00000009753
UniProt:
A0A2D0PQN9
LinkDB
All DBs
Position
23:4749183..4779899
Genome browser
AA seq
1282 aa
AA seq
DB search
MLEIFLVMLCGLTSRVVTKDADNKGRFSSPVLNVTERQIILEKNQMLQLNCRGRWELEWV
YPTGVSKSHPSAHVEETRCGKRKNLYCSSLILSPALAQHTGSYRCRYSHKQHKHTSVYIF
ITDSRQPFVKVQKEIPDVVYMKEGQDLVFPCRVTNPETKVSLIKFPDRKIGTDQRNIIWN
NRKGFVIRSPTYFYIGLFSCETIINGTKYTNKFLTYRPVNKIQKVYLNSTGLEQALQGER
LALNCTVIAEFNSRVNINWSYPGKANSTVSIIRRITQSRTNVVFYSILTVHKLHKADKGM
YTCHVTSGPAKREVNTSVIVYDKPFIKLKHRDGPLVQVNAGQKSFRLSPKLRAFPEPEVI
WWKDGKVAAEQCSRYHVEGNSLVIRDVAEEDAGDYTILTRIQQFGLHQNLTLSLVVNVKP
QIAEKAVAVRDTATMPRSSRQVFRCTVHGIPPPQIQWLWHRCPTKGLCEELVSSSWTAVR
EGAAVTSTYNPVLSVTHVQEALQGKNKTIGILTVGKALISGVYRCVASNSVGTDELDIRF
YVTDVQGGFSVSGESEEGPREGRDYHLSCVANKHLYSNMSWHRVTGSSAGMVEGPPLVGE
LTEGEYSLTLRLTLTNLTAQDSGTYRCSATHLVTMQDSHQDILMTVAVLEAPVLLQNLSD
CSVNISNSVTLQCPASGVPRPLVTWYKDRRKLKQVSGIMLEPEDGTLHIDRIAVEDEGLY
TCQATNERGSVESSAYVSVENSESFSLEIPTLACTCVVATLFWLLLTLLIRKLRQPNSAN
GKTEYLPIILHQGEGPLDEHCDRLQYDAEKWEFPQERLQLEKPLGRGAFGKVMQASAFGI
GNSTGCTTVAVKMLKEGATPSEHKALMTELKILNHIGHHLNVVNLLGACTRPGGPLMVIV
EYCKYGNLSSYLRSKRDVFMLNRVNGEEERGQQDECKSCVESQSSQKVSSEIEGERREEN
EEDNGSVSCSNTPLHLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSDNNVVKICD
FGLARDLYKDPDYVRKGDARLPLKWMSPESIFDKVFTTQSDVWSYGVLLWEIFSLGASPY
PGLNIDEEFCHRLKQGTRMRAPEYSTPEIYNTMLVCWERNPSDRPAFTELVGTLGDLLQA
RVQQDGKDYIPLNTFLSGESGAEYLDYRDTQQGNPSYINTRIDTVSTFEEDLNREVPEDS
QSDSGMVLPSEEFIQLKWTDKFKTKNITRFFLKSQHQERMLASSALRCVSGVPCGCGEND
DTAVPCGAPPPDYNTALLYPSL
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgttggagatctttttagtgatgctgtgtggactgacgagccgagtagtgaccaaagat
gcagacaataaaggaaggttcagctctccagtactgaatgtaactgaacgacagatcatc
ctggagaagaaccagatgctgcagctgaactgcagggggcgatgggagctggagtgggtg
taccccacgggtgtgagcaagagccacccaagtgctcatgtagaagagactcgttgtggc
aagcggaaaaacctgtactgcagcagccttatcctcagccctgctttagcccagcataca
ggctcctaccgctgccgctattcccacaagcagcacaaacacacctctgtctacatcttc
atcacagatagccggcagccctttgtaaaggtgcagaaagagatcccagacgtggtctac
atgaaggaaggacaagacttagtgttcccctgcagggtcactaaccctgaaacaaaagtc
tcattgatcaaatttcctgaccgaaaaattggcaccgatcagaggaacatcatttggaat
aacagaaagggctttgttatccgaagccccacgtacttctacattggccttttttcctgc
gaaaccatcatcaatggaacaaaatacaccaacaagttcttgacttacagaccagtgaat
aagatccaaaaggtatatctgaacagcactggcttggaacaggctctgcaaggcgagcgg
ctggccttaaactgtaccgttatagcggagtttaactcgagagtgaacatcaactggagt
taccctggaaaggccaatagtacggtctcaatcattcggcgtataacacagagcaggacc
aacgtggtgttctacagcatcctcactgtccataaactgcacaaggctgataaaggaatg
tacacgtgccatgtaacaagtggaccagcaaagcgggaagtcaacacctcagttatagtt
tatgataagcccttcatcaagttaaagcatagagatggtccactggtacaggtgaatgca
gggcagaaatcctttcgcctgtcccccaaattacgggctttccctgaacctgaagtcatc
tggtggaaagatgggaaggtggcggctgagcagtgttcacgttaccacgtagaaggcaat
tccctggtgattcgagacgttgcagaggaggatgcaggggactataccatcctcactcga
atccaacagtttggccttcatcagaacctcacactctcacttgttgtgaacgttaagcct
cagattgcagagaaagctgtggcagtgcgggacacagcaaccatgccacggtccagcagg
caagtcttccgctgcaccgttcacggcatcccgccacctcaaatccaatggctctggcat
cgctgccctactaaaggcttatgcgaggagctggtttcctcgtcctggactgcagtgaga
gagggggcagcggtcacgtccacctacaatcccgtactgagcgtcacacacgtacaggaa
gcgttgcagggaaagaataagaccattggtattttaacagttggcaaggcattaatatct
ggcgtctatcgctgtgtggcttccaactcagtgggtacagatgaactggacatccgcttc
tatgttacagacgtccagggaggcttcagcgtctctggggagtccgaggaagggccaaga
gagggcagagactatcacctgtcctgtgtagccaataaacacctgtattccaacatgtca
tggcacagagtgacaggcagctcagcaggtatggtggagggtccacctctggttggagag
ctgacggagggagaatactcactcactctgcgcttgacgttgacgaacctgacagcgcaa
gactctgggacgtaccgctgctctgccacacacctggtcacgatgcaggactcccatcag
gatatactcatgacagttgcagttctggaggctccagtgttgctgcagaacctcagcgat
tgcagtgtgaacatcagcaactcggtgactcttcagtgccccgccagtggagtgccacga
cctctcgtcacgtggtacaaggaccggaggaagctcaagcaggtgtctggcatcatgctg
gagccagaagatggcactctccacattgaccgcatcgctgttgaggacgagggcttgtat
acatgtcaggccaccaacgagagaggatctgtggagagctcggcttacgtttcagtcgaa
aattctgagtctttctctctggagatccccacattagcctgcacttgtgtggtggccact
ctcttctggctgctcctaacgctgctcattcgcaagctcagacagccaaattcagcaaat
ggcaagacagaatacctgccaatcatcctgcaccagggggaggggcctctagatgaacac
tgcgataggctacagtatgatgccgaaaagtgggagttcccacaggagcgtcttcagctg
gaaaagccactgggacgaggggcatttggcaaagtgatgcaggcgtccgcctttggcatc
ggcaactcaaccggctgcaccaccgtggctgtcaaaatgctcaaagagggagccacgcca
agcgagcacaaagcactaatgacagagctgaaaatcctcaaccatatcggacatcacctc
aacgtagttaatctccttggtgcctgcaccagaccaggagggcctcttatggtcatagtg
gaatactgcaagtatggaaacttgtcctcatacctaaggagcaagagggacgtgttcatg
ctgaacagggtgaatggagaagaggaaaggggacagcaagatgagtgtaagagctgtgtg
gagagccagagcagtcagaaagtcagctctgagatagagggtgagagaagagaggaaaat
gaggaagacaatggttctgtctcgtgctcgaacactcctctacacttagaggacctgatt
tcctacagcttccaggtggccagaggcatggagttccttgcctcacgcaagtgtatacac
cgagaccttgctgcccgaaacatcctgctatctgacaacaacgtggtgaaaatctgtgac
tttgggctggcccgagacctttacaaagatcctgattatgtgcgcaaaggagatgctcgc
ttaccgctgaaatggatgtctccggaatcgatcttcgacaaggtcttcaccactcagagt
gatgtgtggtcttacggtgttctgctctgggaaatcttctcacttggggcgtccccgtat
ccaggactcaacattgatgaggagttttgccacagactgaaacaaggaactcgaatgcgt
gccccagaatacagcacccctgaaatctacaacactatgctggtgtgctgggagagaaac
ccgtcagacagacccgccttcactgagctggttggaacgctaggagaccttctccaggct
cgtgtgcaacaggatgggaaggattacatccccttgaacacgtttttgtcaggagagagt
ggtgcagagtatctggattacagagacacacagcaaggaaacccgagctacatcaatacc
agaatcgatactgtctccacgtttgaagaggacctgaacagagaagtcccagaagattcc
cagtctgacagtggcatggttctcccatctgaagagttcatccagctgaaatggactgac
aagttcaaaactaaaaacataaccaggttcttcttgaaaagccagcaccaggagagaatg
ttagccagttcagcactccgctgtgtgagcggcgtcccctgtggctgcggagagaacgac
gacactgccgtcccctgtggtgcacctcctcctgactacaacactgctttgctctaccct
tctctttaa
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integrated database retrieval system
