Ictalurus punctatus (channel catfish): 108256716
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Entry
108256716 CDS
T04658
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A isoform X1
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108256716
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ipu04050
]
108256716
04090 CD molecules [BR:
ipu04090
]
108256716
Cytokine receptors [BR:
ipu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
108256716
CD molecules [BR:
ipu04090
]
Proteins
108256716
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
108256716
NCBI-ProteinID:
XP_017309362
Ensembl:
ENSIPUG00000013219
UniProt:
W5UE36
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Position
23:6482135..6497113
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AA seq
572 aa
AA seq
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MRAYFSTSWIFRGWIYCLIFALCIQTKHAKPPCNQMQYLWKGVCCSMCKPGTYRSAHCTE
NDDTRCRPCGKDEYQSEYNFEETCHPQKFCDEGKGFYRPSPSSTTELESCRCKEGFQCTT
TYCEFCDKIKPCPPGQGLAGELGKQSCKDCDYGFFSDSTSAEACKKWTDCKAIGKTEEKP
GSTEADVTCGRFVYTTSWAIVAIPCAIIVIFAVILSCYKDKLSILSVNLRTCIQNIKQSR
IQQETLTPPFHSNCPLYEITSQEDDGTPEYLSMCSKANCDSPGLDKAQGNKKNTHSSKLE
RDQADGSSGSSTEGSEGPGSPFPGSSCSCLIMKEPMEVGENEDCSELVATGLAGCCSCAQ
GENMFAKPSKDSDVSLKEPPLCGSCYTESLSGCLQGSQELYMDYSNEAGKEVMSEIRDLH
SDTSAYERNEPQCCSIESTAILSSLSTSNNQGLSLNSSTDNNQPKADADLEIQSQSSEAA
LTCAQVTGNNNTTFISTGQVMNFTGDVIMVYVSQTSLGSSGDEEPYASPVQEQSAECGVQ
NVSKSYQRSEEHGRHIPVQEMTNQRPQLNLSV
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagagcttacttctccaccagttggatatttcgaggttggatctactgcctgatcttt
gccttatgcatccagacaaagcatgccaaaccaccatgcaaccaaatgcagtacctctgg
aaaggcgtatgctgtagcatgtgcaaacctggaacgtatcggtctgcgcattgcactgag
aatgatgataccaggtgtcggccatgcgggaaggacgagtaccagtcagaatataacttc
gaggagacgtgccatccacagaagttctgtgacgaggggaaaggattttatcgtcctagt
cccagtagcaccactgagcttgaatcatgtcggtgtaaagagggcttccagtgtaccacc
acctactgcgagttctgtgataaaatcaaaccctgtcctccgggccaaggacttgcaggg
gagcttggcaaacagtcatgtaaggactgcgactacggatttttctctgattccacttca
gcagaagcatgcaagaaatggacagactgtaaagccattggcaagactgaggaaaagcca
ggtagcactgaggcagatgtgacgtgtggacgcttcgtgtacacgacatcatgggccatt
gtggcaataccctgtgccataatcgtcatatttgccgtgattctttcctgctacaaggat
aaactgagcatcctttcagtcaatctacgaacctgcatccagaacattaaacagagtaga
atccaacaagagacgctaacaccgccattccatagcaactgccccctgtacgagatcacg
tctcaggaagatgacggtactccagaatacctgagcatgtgctccaaagccaattgtgat
tcccctggcctagacaaggctcaaggaaacaagaagaacacacactcctccaagctggaa
cgggaccaggctgatggatcatcaggcagctccactgagggctctgagggtccaggttct
ccatttcctggcagctcctgcagctgcttgatcatgaaggaaccgatggaggtgggcgag
aatgaggactgcagtgaactggtggctacgggtctggctggctgctgttcctgtgctcag
ggggagaacatgttcgccaaaccaagcaaggatagtgatgttagcctgaaagagcctcct
ctgtgcgggagctgctacactgagagcctttctggatgcttgcaaggctctcaggagctc
tatatggattacagcaatgaagctggcaaggaggtcatgtcagagatcagggatttacac
agtgacacaagtgcatatgagagaaatgaaccgcaatgctgcagcatcgaatccactgcc
atactatcatcgcttagtaccagcaacaaccaggggctctcacttaattccagcacagat
aacaaccagcccaaagctgatgcggatttggaaatccagagccagagctctgaggctgct
ctcacctgtgctcaggtgactggaaacaacaacaccacattcatctccaccggccaggtg
atgaacttcacgggtgatgttatcatggtgtacgtcagccagacgtcactgggtagcagc
ggagatgaagagccctacgccagtccagttcaggaacaatcggctgaatgtggcgttcag
aatgtgtccaaatcctaccaacgctcagaagagcatgggagacatatacctgtgcaggaa
atgacaaaccagcgccctcagctaaacctctcggtctaa
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