Ictalurus punctatus (channel catfish): 108257194
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Entry
108257194 CDS
T04658
Symbol
rapgef5a
Name
(RefSeq) rap guanine nucleotide exchange factor 5 isoform X1
KO
K08019
Rap guanine nucleotide exchange factor 5
Organism
ipu
Ictalurus punctatus (channel catfish)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
DEP
RasGEF_N
DUF771
Motif
Other DBs
NCBI-GeneID:
108257194
NCBI-ProteinID:
XP_017310231
UniProt:
A0A2D0PXS6
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Position
24:16791251..16873134
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AA seq
869 aa
AA seq
DB search
MEDSESAADDGLLATWRWSRNAREQVQLKQKIRDLPGLLKHGLHLRKKSQSPDTVPGPST
GVHTKSKPSCSQSFPCAGRALRNAFLSHGPYPAKDKIHLARIIRRSYVGVELVQWLLEQC
VFVQCRMMAARVWQVLLELGILHSVDQRVVFEDSNTYYQFSFEECDTQGCEFRSEEEWQN
GVRLLMQLVPYVQFRVVSPPEEDPEGKRDICGEILQMKALERLTSTVQNELAAALARKAR
KSMSEDDSSETGESSPQEPQKPIEDKAKDGVCALRSPDEFSRLEMVQRLAKDGCRFLQNQ
NYRLPERSAQAQGEAAVRVCLKERGQDVLVLQRVASDRASPQTAGGVKEDDGDRRYVVVS
GTPHKILEHLLSDLRLDEHQGAMEGKEAEMLLDDFLLTYLVFMSTNDLCQALLGHYCTKR
CRGKEEGKEALYRKRKVLHLVSQWSSLYKDFLREEEHVKLFMKTLYRYVLEDVYEFPTLE
KDLKEFQKLLRRRHTVDDYSPHQKNKALFQQLSLRENGVQLRGAHSEQREVMCHVYVSSD
SYLSMRVRTTVVAQELLHTVAQRMEKPVEDMVLVAQTYTGEKRVLQPHDCIFSESLALPG
RLMACWRDLNEILPPLTDCVELAQRPSRLLGINTWDVSVALTNLDWSLFNSVHEQELVYY
TFSRQASSGHTVALEQLLQRCNEVQQWVMSEVLLCPSLGKRVQLLKKFIKIAAHCKAQRN
LNSSFAIIMGLNTAAVSRLNQTWEKVPGKFKKLFSELELLTDPSLNHKAYRDAFRKMKPP
KIPFMPLLLKDITFIHEGNKTFHDNLVNFEKLHMIADTVRHIRHCQTEQTGSEVAPSDSV
DMRSSVHYLHIIDNQQTLFELSHRLEPRA
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcggagagcgccgcggatgacggactgctggccacctggcgatggagccgt
aacgcgcgggagcaggtacagctgaagcagaagatcagagacctgcccggtttactgaag
cacggcttgcatttgagaaagaagagccagtcacctgacaccgtccccggacccagtact
ggcgtccacaccaaatccaagccgtcatgctctcagagttttccctgtgcaggccgcgca
ctgagaaacgcatttctgtcccacggcccgtatccagccaaagacaagatccacttggca
cggatcatcaggaggagttatgtaggtgtggagctggtgcagtggctgctggagcagtgt
gtgtttgtccagtgcaggatgatggctgcccgggtttggcaggtgctgctggagcttggc
attctgcactcagtggaccagcgagtggtgttcgaagactccaacacatactaccagttc
tcctttgaggagtgtgacacacagggctgtgagtttcgctcggaggaggagtggcagaac
ggagtcagactgctcatgcagctcgtcccctacgtccagttcagggtggtcagtcctccc
gaagaggatcccgaaggaaaacgggatatctgtggcgaaattctgcagatgaaagctttg
gaaaggcttacatccacggtacaaaacgaactagctgctgccctggcaaggaaagcacgg
aaatcaatgtctgaggacgacagttcggaaactggagaaagttccccacaagaaccacag
aagccaattgaagacaaagccaaggatggtgtgtgtgcgctgaggtcccccgacgagttt
tcacgcctggagatggtgcagaggctggccaaggatggctgccgcttcctccagaaccag
aactacagactacctgaacgctccgcacaggcgcagggcgaggcagcggtgcgggtgtgt
ttgaaagagaggggtcaggatgtgctggtgctccagagagtggcgtctgatcgagcatcg
cctcaaacagcgggaggagtcaaagaggacgacggcgataggaggtacgtggttgtgtct
gggacaccccataagatcctggaacacctgctgagtgacctgaggcttgacgaacaccag
ggggcgatggagggcaaagaagccgagatgctgctggatgactttttgctcacctatctc
gtgttcatgtccaccaacgatctctgccaggcgctgctcggccattactgcactaagcgc
tgccggggtaaggaggaaggaaaggaggccctctacaggaagaggaaggtcctgcacctc
gtctcacagtggagctctctgtataaagacttcctgcgggaggaagagcacgtcaaactg
ttcatgaagacgctgtaccgctatgtcctggaggacgtctatgagttccccaccctcgag
aaggatctgaaggagttccagaaacttctacgccgtagacacactgtggatgattattca
cctcaccaaaagaacaaagctcttttccagcagttgagtctgcgggagaatggcgtccag
ctccgtggagcacacagtgagcagcgagaagtaatgtgtcatgtgtacgtgagctcagac
tcgtatctgagcatgagagtgaggacaacagtagtggctcaggagctcctgcataccgtg
gctcagaggatggagaaacctgtagaggacatggtgctggtggcccagacctacaccgga
gagaaacgtgtccttcagcctcacgactgcattttctccgagtctctggctcttcctggg
agactgatggcctgctggagagacctgaatgagattctgcctcccctaacagactgcgtg
gaattggcacagcggccgtcgcgtctcctcggcatcaacacgtgggacgtgtctgtggct
ctcaccaacctcgactggagcctgttcaactctgtacacgagcaagagctggtgtactac
acgttcagtcgacaggcgagcagtggccacacggtggcgctggagcagctcctgcagcgc
tgtaacgaggttcagcagtgggtcatgtccgaggtcctgctgtgtccttcgctcggaaaa
cgagtccagctgctcaagaagtttattaagatcgctgcgcactgtaaagcacagaggaat
ctgaactcctcctttgccatcattatgggcctaaacacggcagcagtgagtcgactcaat
cagacctgggagaaagttcctggaaaattcaagaagcttttctccgaactcgagttatta
actgatccgtctctaaaccacaaggcctacagagacgccttcaggaagatgaagccgccc
aaaatccccttcatgcctctgctgcttaaagatatcacttttattcacgagggaaacaaa
acatttcatgataatctcgtcaacttcgagaagctgcacatgattgcagacaccgtccgt
cacatacgccactgtcagaccgaacaaaccggaagcgaagttgccccgagcgatagcgtg
gacatgagatccagcgtgcactaccttcatattattgacaatcagcagactctgttcgag
ctctcgcacagactggagcccagagcgtaa
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