Ictalurus punctatus (channel catfish): 108257411
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Entry
108257411 CDS
T04658
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00514
Other types of O-glycan biosynthesis
ipu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
108257411
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108257411
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ipu01003
]
108257411
Enzymes [BR:
ipu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
108257411
Glycosyltransferases [BR:
ipu01003
]
Glycan extension
O-Glycan
108257411
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
108257411
NCBI-ProteinID:
XP_017310651
Ensembl:
ENSIPUG00000018394
UniProt:
A0A2D0PYY2
LinkDB
All DBs
Position
24:7228784..7236949
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AA seq
386 aa
AA seq
DB search
MLKSSSRKTVLCAVGAAVTCAALLVVVAQQQQRSSSSAHGDAHGDAEVGMRTLQSVAELE
VDGGVQSDQAAAAQDGGGGKKGFSAYFSKLTRSRRDAEKPTAAVAGAPSSAPAEELRPED
LFIAVKTTKKFHQPRLDLLLETWISRNVQQTYIFTDGEDEELKKKMGNHVINTNCSAAHS
RQALSCKMAVEYDKFIESGKKWFCHVDDDNYMNVKTLVKLLSLYPHTQDLYIGKPSLDRP
IEATERLGDNKMRPVNFWFATGGAGFCVSRGLALKMSPWASGGHFMNTAEKIRLPDDCTI
GYIIESVLGVPLTRSNLFHSHLENLQQVSQSEVHKQITLSYGMFENKRNIINMKGVFPVQ
EDPSRFKSVHCLLYPDTPWCPPQVTY
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaagttccagcaggaaaactgtgctctgtgcagtcggagcagccgtcacctgc
gcggcgctgcttgtggtggtcgctcagcagcagcagcgcagcagcagcagcgcgcacggt
gacgcgcacggtgacgcggaggtggggatgcgcaccttacagagtgttgccgagttggag
gtggatggaggagtgcagagcgaccaagcagcagcagcgcaggacggaggaggaggaaag
aagggattttccgcctatttttccaaactgacgcggagcaggagagatgcggagaaaccc
accgcggcggtcgcgggcgctccgtccagcgcgccggctgaagagctgcgtcctgaggac
ctcttcatcgccgtgaagaccaccaagaagttccaccagccacggcttgatctgctgctg
gaaacctggatttcaaggaacgtgcaacagacgtacatcttcacagatggcgaggatgag
gagctgaaaaagaaaatgggaaaccatgtcatcaacaccaactgctctgctgctcacagt
cgccaggctctgtcctgcaagatggctgtggagtacgacaagtttatcgaatcaggaaaa
aaatggttctgccatgtggatgatgacaactacatgaacgtcaagacacttgtcaagctg
ctctctctataccctcatactcaggacttgtacattggcaaacccagcctggacaggccc
attgaggctacagagagactcggtgacaacaagatgcgacccgtgaatttttggtttgcc
actggaggagctggtttctgcgttagccgtggtctggctctgaaaatgagcccttgggca
agtggtggtcatttcatgaacaccgcagagaagatccgtctaccggacgactgcaccatc
ggctacatcatcgagtcggttctgggggttccactgacacgcagtaacctgttccactcg
catctggagaacctgcaacaggtgtcccaatcggaagtacacaaacagattacactgagt
tatggtatgtttgagaacaagaggaatataatcaacatgaaaggagttttcccggttcag
gaggacccatccaggtttaagtctgtgcactgtctgctctacccggatactccgtggtgt
cctcctcaggttacctattaa
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