Ictalurus punctatus (channel catfish): 108257517
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Entry
108257517 CDS
T04658
Name
(RefSeq) tumor necrosis factor ligand superfamily member 6
KO
K04389
tumor necrosis factor ligand superfamily member 6
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04060
Cytokine-cytokine receptor interaction
ipu04068
FoxO signaling pathway
ipu04210
Apoptosis
ipu04217
Necroptosis
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108257517
04068 FoxO signaling pathway
108257517
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108257517
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108257517
04217 Necroptosis
108257517
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108257517
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108257517
04052 Cytokines and neuropeptides [BR:
ipu04052
]
108257517
04090 CD molecules [BR:
ipu04090
]
108257517
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108257517
Cytokines and neuropeptides [BR:
ipu04052
]
Cytokines
Tumor necrosis fators
108257517
CD molecules [BR:
ipu04090
]
Proteins
108257517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
108257517
NCBI-ProteinID:
XP_017310864
Ensembl:
ENSIPUG00000012199
UniProt:
W5U9T8
LinkDB
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Position
25:10568324..10571247
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AA seq
260 aa
AA seq
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MHSKLRYTYPPVFTVDAAGGFPPQHQAAGIEPPLVPCWTLPPARVRAKTRGCGGMSSAVC
LLIMVLLIVFAVLGLGAYQIMKLQTELLHLKQEIRPQSEGSTPQRLVGHQAEDIMEPKHT
PAAHLIGQKQDNNLKTLKWESRHGRAFTDGILYRNGGLQVNETGHYFVYSRVEFQLKDCK
PRDTLIHTVYVKRGERPLTLMIDHREGFCQVGSKEWSTVGSNLGSMHQLMQYDWVFVNVS
QPTRLSSDHQSNYFGLFKLP
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcacagtaaactcaggtacacgtaccctccagtgttcacagttgatgctgcaggaggc
tttccccctcagcatcaggctgcaggcatcgagcctcccctggtcccctgctggacatta
cctcctgcccgagttcgggccaagacaaggggctgtggaggaatgagttctgcagtatgc
ctcctgattatggtccttctgatagtgtttgctgtgctgggacttggagcctatcagatc
atgaaactgcagacagagctgctacatctgaaacaggaaatacgcccacaatctgaaggc
agtacaccacagaggctagttgggcaccaagcagaagacattatggagcccaagcataca
ccagctgcacatctgataggacaaaagcaggacaataatctgaagaccctgaagtgggaa
tcaaggcatggccgtgctttcacagatgggatcctgtaccgcaacggcggcttacaagtg
aatgagacgggccattactttgtctactcacgtgtggagttccaattaaaagactgcaaa
ccaagggacactctgatccacacagtgtacgtaaagagaggcgaacggccgctaacactc
atgatcgatcatcgagaaggtttctgccaagtcggaagcaaggaatggtcgacagttgga
agtaaccttggctccatgcatcagctcatgcaatatgattgggtgtttgtcaatgtatcc
cagccaacccggctcagctctgaccaccaaagtaactactttggtctttttaaactccca
taa
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