Ictalurus punctatus (channel catfish): 108258483
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Entry
108258483 CDS
T04658
Symbol
raph1b
Name
(RefSeq) ras-associated and pleckstrin homology domains-containing protein 1b isoform X1
KO
K23488
Ras-associated and pleckstrin homology domains-containing protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108258483 (raph1b)
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
108258483 (raph1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA_2
RA
PH
PH_11
RBD
PI3K_rbd
Motif
Other DBs
NCBI-GeneID:
108258483
NCBI-ProteinID:
XP_017312628
Ensembl:
ENSIPUG00000021730
UniProt:
A0A2D0Q1L9
LinkDB
All DBs
Position
26:13849001..13920497
Genome browser
AA seq
1593 aa
AA seq
DB search
MEQVSDDELDHAAEEDSDKEDQDLDKMFGAWLGELDKLTQSLDDGRHPGKVQKAPLREET
NLANFSYRFSMYNINEAINQGEPVDLDALMADLCSIEQELSTIGKPSSSSSSSSSSFSSS
SSSSGRPTDAKSRQRAAQGRSASARHAGGSSGGSACSSSHASPAGTVRVGGSQSRPMASN
FSLEDITAQLEQASRSMDEAARQTSESSVSNSQLRRAGSVGGASDQEARSVSRSSRSSVN
SVSASSMDSLDTRGQDGEAQNQTSTEHASLRRVNGNAARRHLDFTSREGEVDQCTHSYLD
RETSLILKSIAGKPSHLLTKEEQAAKAKAEKIRVALEKIKEAQVKKLVIRVHMSDESSKT
MMVDERQSVRQVLDSLLDKSHCGYSPDWALVETITELQMERIFEDHENLVENLLNWTRDS
QNKLMFIERIEKYALFKNPQNYLLGKKETSEMADRNKEALLEECFCGGSVSVPEIEGVLW
LKDDGKKSWKKRYFLLRASGIYFVPKGKAKASKDLVCFLQLDHVNVYYGQDYRSKYKAPT
DYCLALKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKYGKQLYLNYQEAMKRTEAAY
DWSSLSSSSIKSGTSSVSNPESQSNHSSQTDSGVSDGTSSTHARSQSVVSSIFSEAWKRG
TQMEESTRTRPESTRSSHSIHSVHSGHSSHAHYNTLHLAQQQHTAASVHLQQHVQPQSNS
VPHPHAQSALQPRSSITQTSIQAPPMPSPAPPHPAPTPPKLSQVLPQSSPVLPQPSPAPP
KLSPVLLQSSPVLPLPSPVLAQSSPAPPPPPPPPPPPPPPVCFHHYSGPHIFAKYSTINR
LKNASQAAKPHPQAQQVLPVPSPQPLKPHINNIPPGANAPPPPPPPPPAPMPAPGSAMAV
LKLGPPSPATVPQFMPPPPPSPPLPSPPPPPTQSHPLPPPPPPAAIQSHSFPPPPAPVQS
HSFPPPPPPATIQSHLFPPPPEPIQCQALPPPPPPAPIQSHPLAPPPLPIQSQPFPPPPP
IQSQSLPSPPPSPFRSDAFPPPPPPLQTNSLPPPPPAQPAPPPLTSNGLKHILAQKFPSI
PRDVSPSGSQTQSPPPPPPPPPPPPPTPPAPPLPPQQLPSLAPPPPPPPPPPPPPAPGPP
RALPKIFPGAFPPQTAPKPSGVTMQVSPVAPLFPGPPPPPPPPPPPPPPPAPVKSHPPPT
LPKQQSITKTMPPLNQTSTTSSLVKQLASQFPGAVPLVANHVETHKPPLSAPAVKTKPKW
QPGGQVQQQQRSPEFPPPPPDTTLSFPAPPPPCPPPPPPPGPAPPPPPPLPPSHLSSPMK
APSGSYGGNKKPPPTPLRNSSVKFNSSAEYQESRQNLVSKFNPSTASTASVSSGSPSKDY
FTGPPAPPKPGKLNLANLPLALQNRVGQNQQPSTHFPSHAPTENNSFPPPPPPPPPPPHI
SDLPPPPPLPGTPKVAVVNPQPQPTWSKNSLKKTAPPTSLRRNNTNPEPPSVSPPLQGGP
APSTSTKGSTQPNFLEDLNRTLRRKSLRNSAAKLDPVATMDDMVLPPPPPELLDQQRHSG
SGYISSNISGYATIRRGPPPAPPKRDNGTKLTN
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggtgtcagatgatgagctggaccatgctgctgaggaagacagcgataaggag
gatcaggacctggacaagatgttcggagcctggttaggagagctggacaaactcacacag
agtttggatgatgggcgtcatccaggaaaagttcagaaagctcctctcagagaagagacc
aacctggccaacttctcttaccgattctccatgtacaacatcaatgaagccataaaccag
ggtgagccggtggacctggacgctctcatggccgacctgtgctccatcgagcaggagctc
agtaccatcggcaagccttcctcctcgtcctcctcgtcctcttcctccttttcttcctca
tcttcctcctccggtcgtcccacagacgcgaagtctcgccagcgggctgcacaggggcgt
tcggccagcgcccgccatgccggaggcagcagcggggggagtgcgtgcagcagcagccac
gcctctccagcaggtacagtgcgagtgggtggcagccagagccgaccaatggcgtctaac
ttctctctggaagacatcacggcccagctcgagcaggcctcacggagcatggacgaagcc
gcccgtcagacttcagagtcttccgtgagcaactctcagctcaggcgtgcaggctcagtg
ggcggggccagcgaccaggaggcacgatctgtcagtcgctcgtcgcgctccagcgtcaac
tccgtctctgcctccagcatggactcactggacacaagggggcaggacggggaggcgcag
aaccaaaccagcacagagcatgcatcattgagaagggtcaatggtaacgcagccagacgg
cacctagacttcacctcccgcgagggcgaagtggatcagtgcactcactcctacctggac
agggagacctctctgattctcaaaagcattgcaggaaagccctctcacctgctgaccaag
gaggagcaggctgccaaagcaaaggcggaaaaaatccgtgtggctctggagaaaattaaa
gaagcacaggtcaaaaagctggtgatccgcgtgcacatgtcggacgagagctcgaagacg
atgatggtggacgagcggcagagtgtaaggcaggtgctggacagcctgctggataagtcc
cactgcggatacagtcctgactgggctctggtggagaccatcaccgagctacagatggag
cgtatttttgaggaccatgagaacctggtggagaacctgcttaactggaccagagacagc
cagaacaagctgatgttcatcgagcgtattgagaagtatgcgctcttcaagaacccgcag
aactacctactgggaaaaaaggagacttctgagatggccgacagaaacaaggaggcactg
ctggaggagtgtttctgcggtggctctgtatcagtgccagagattgagggagtgctctgg
ctgaaggatgatgggaaaaagtcatggaagaagcgctacttcttactacgagcgtctggc
atttactttgtgcctaagggcaaggccaaggcctctaaagacttggtgtgcttcctgcaa
ctggatcatgtaaatgtttattacggacaagactaccggagcaagtataaagctcccact
gactactgcctcgccctcaagcaccctcagattcagaagaagtctcagtacatcaagtat
ctgtgctgcgatgatgtcagaaccctgcaccaatgggtcaacggcatccgcattgccaag
tatgggaagcagctgtacctgaactatcaggaggctatgaaacgcactgaggccgcttac
gactggtcttctctatccagctccagcatcaagtctggcaccagctcagtcagcaaccct
gagtcacaatccaaccactccagtcagacggacagcggggtgtcagatggcacctcgtcc
acacatgcgcgctcacagagtgtcgtcagctccatcttctccgaggcctggaagagaggc
acacagatggaggagagtaccagaacgagaccagagtcaacgcgttcaagccattctatc
cacagtgtccatagtggccactccagccatgcacactataacactcttcatttggcgcag
cagcagcatacagctgcctcagtgcatttgcagcagcatgtgcagcctcagtcaaattca
gtgccacacccacatgcacagtcagccttgcaacctcgtagtagcattactcaaacctcc
attcaagctcctcccatgccatctccagctcctccccatcctgctccaactccacccaag
ctctctcaagttctaccccaatcctctccagttctgccccagccctctccagctccaccc
aagctttctccagtcctactccagtcctctccagttctgcccctgccctctccagtactg
gcccaatcctctccagctccacccccaccgccaccacctcctccgccaccccctcctcct
gtctgcttccatcactactcaggcccacatatatttgccaaatacagcaccatcaaccgc
ctgaagaatgcctctcaggctgctaagccacacccccaagcacagcaggtgcttccagta
ccatcccctcagcctttgaagccccacatcaacaatattccaccaggagcaaatgcccca
cccccaccaccacctcctccaccagcacctatgcctgctccaggttcagcaatggccgtc
ctaaaacttggccctccaagcccagccactgtgcctcagttcatgccaccacccccacct
tctccaccactgccatctccacctccaccaccaacccagtcccaccctcttcctccacct
ccacctccagcagctatccaatcccactcttttcccccacctccagcacctgtccaatcc
cactcttttcccccacccccacctccagcaactatccaatcccacctttttcccccacct
ccagaacctatccagtgtcaagctttacccccaccaccacctccagcacctattcaatcc
cacccccttgctccacctccactacctatccagtcccagccttttcctccacctccacct
atccagtctcaaagtcttccatctccaccaccatcccccttccgatctgatgcttttccc
cctccgccacctccactgcaaaccaacagcctgcctcctccacccccggcacaaccagcc
ccacctccattaacttccaatggcctcaaacacattctagcccagaagttccccagcata
cccagggatgtatccccttcaggcagtcaaactcagtcgccaccaccccctccacctcct
ccaccaccaccaccccccactcctcctgcccctcctctcccacctcagcagcttccttct
ctagcaccacctccacctccccctcctccacctcccccaccacctgccccagggccacct
cgagcgttgcccaaaatctttcctggagcatttccacctcaaactgcaccaaaaccatca
ggcgtcaccatgcaagtgtctccagttgcacctctttttccaggtcctcctccacctcct
ccacctccaccaccacctccaccccctcctgcaccagtgaaatctcatccaccacctaca
ctacccaagcagcagagcatcaccaagacgatgccccctttgaaccagacctctactaca
tcatctttggtcaaacagcttgccagccagtttccaggtgccgttcccttagtggccaac
catgtagaaactcacaaacctccactatcagcacctgcagttaaaactaaaccaaaatgg
caacctggtggacaagttcagcagcaacagcggtcacctgagtttccaccaccacctccg
gatactacactctctttcccagcaccaccacccccatgtccacctcctccacctccccca
ggtccagcaccaccacctccacctccactgcccccttcacatctaagttctccaatgaag
gccccctctggatcctatggcggaaacaagaagcctcccccgacccctctacgcaactct
agtgtcaagttcaactcttcagccgaataccaggagtcccgccaaaatctagtgagcaag
ttcaaccccagcacagcttctactgcttccgtgtcttctggttctccttcgaaggattat
tttactggaccacctgcaccacctaaacctggcaaactgaacctggccaatctaccactg
gctttgcagaacagagtgggtcaaaaccagcagcccagcacacattttccctcccatgct
ccaactgagaataacagctttcctcctccccctcctcctcctcctcctcctccacatata
tcagatctcccacctccaccgcccctaccaggcaccccaaaagttgctgtggtgaacccc
cagccccagcctacatggagcaagaactccctgaagaagacagcacctcctacgtcactg
cgccgcaacaatacaaatccagagcctccatcagtatctccacctcttcagggagggccc
gcaccttcaacctctacaaagggaagcactcagccaaactttctagaggacttgaaccgg
actctaaggcgcaagtctttgcgaaactctgcagccaagttggaccctgtggccaccatg
gatgacatggtactgcctccacctcctccagagcttcttgaccagcaaagacatagtggg
agtgggtatatatccagcaacatctctggctatgcaacaataaggcgaggcccacctcct
gccccacctaaacgggacaacggcaccaaactgacaaactga
DBGET
integrated database retrieval system
