Ictalurus punctatus (channel catfish): 108258586
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Entry
108258586 CDS
T04658
Symbol
psen2
Name
(RefSeq) presenilin-2 isoform X1
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108258586 (psen2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108258586 (psen2)
Peptidases and inhibitors [BR:
ipu01002
]
Aspartic peptidases
Family A22: presenilin family
108258586 (psen2)
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Gene cluster
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
108258586
NCBI-ProteinID:
XP_017312787
Ensembl:
ENSIPUG00000006840
UniProt:
A0A2D0Q3B7
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All DBs
Position
26:17969950..17987292
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AA seq
438 aa
AA seq
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MNGSESEEDSCSERTALMGTESPSLQPYDRQREPPQDTDAPRRQPVSSDSSDPRRVPRDA
VQDGEDEELTLKYGAKHVIMLFIPVTLCMVVVVATIKSVSFYTEKNGQRLFYTPFPEDPN
TVGERLLSSFLNTIVMISVIVVMTIFLVLLYKYRCYKFIHGWLMLSSLMLLFWFSFMYLE
EVFKTYNVAMDYPTVAMIIWNFGAVGMVCIHWKGPLQLQQAYLIMVSALMALIFIKYLPE
WSAWVILAGISIYDLVAVLSPKGPLRMLVETAQERNEPIFPALIYSSAMVWMVGMANPSQ
AANAVCSSDEEVLHNEAGVLEREGAEPESQALHGQSRSHSVEEDLEEDRGVKLGLGDFIF
YSVLVGKAAATGGDWNTTLACFVAILIGLCLTLLLLAIFKKALPALPISITFGLVFYFST
DNLVQPFMDSLAAHQYYI
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaacggctcggagagcgaagaggactcgtgtagcgagaggacggcgctcatgggcacg
gagagtccgagtttgcagccgtatgaccggcagcgtgagccgccccaggacaccgacgcc
ccccggcgtcagcccgtcagctccgactcgtcagacccgaggcgagtcccgcgcgatgcc
gttcaggacggcgaggacgaggagctgacattgaagtacggcgcgaaacacgtcatcatg
ctcttcatccccgtcacgctgtgcatggtggtcgtcgtggcgaccatcaaatccgtcagc
ttctacacggagaagaacggccagcgcttgttttacacacctttcccggaggacccgaac
accgtgggcgagaggttgctgtcgtcgtttctcaacacgatcgtgatgatcagcgtgatc
gtggtcatgaccatcttcctggtgctgctgtataagtatcgctgctataagtttatccac
ggctggctgatgctgtcctccctgatgctgctcttctggttcagtttcatgtatctggag
gaggtgtttaagacgtacaacgtggcgatggactacccgacggtggccatgattatctgg
aactttggtgcggtggggatggtctgtatccactggaaagggccactgcagctgcagcag
gcctacctcatcatggtcagcgccctcatggccctcatcttcatcaaatacctacctgag
tggtccgcctgggtcatcctggccggcatctctatctatgatctggtagctgtactgagc
cccaaaggtcctctgaggatgctggtggagacggcgcaggagaggaacgagcccatcttc
cccgctctcatctactcctctgctatggtgtggatggtgggcatggccaatccgtctcaa
gctgctaatgcagtatgttcctcagatgaggaagtgcttcataacgaggccggggttttg
gagagggaaggggcggagcctgagagtcaggcgttgcatgggcagagcaggagccactct
gtagaggaggacctggaggaagacaggggcgtgaagctaggattaggagacttcatcttc
tacagtgttctggtggggaaagcagcagccacaggtggagactggaacaccacgctcgcc
tgcttcgtagccatccttatcggtctgtgcctgacactcctgctgctggccatctttaag
aaagctctcccggctctgcccatctccatcacgttcggcctcgtcttctacttctccact
gacaacctggtgcagccgttcatggacagcctggcagctcatcagtactacatctga
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