Ictalurus punctatus (channel catfish): 108258691 Help Entry 108258691         CDS       T04658                                  Symbol actb1 Name (RefSeq) actin, cytoplasmic 1   KO K05692   actin beta/gamma 1 Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu03082   ATP-dependent chromatin remodeling ipu04145   Phagosome ipu04210   Apoptosis ipu04510   Focal adhesion ipu04520   Adherens junction ipu04530   Tight junction ipu04810   Regulation of actin cytoskeleton ipu04814   Motor proteins ipu04820   Cytoskeleton in muscle cells ipu05100   Bacterial invasion of epithelial cells ipu05132   Salmonella infection Brite KEGG Orthology (KO) [BR:ipu00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     108258691 (actb1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     108258691 (actb1)   09143 Cell growth and death    04210 Apoptosis     108258691 (actb1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     108258691 (actb1)    04520 Adherens junction     108258691 (actb1)    04530 Tight junction     108258691 (actb1)   09142 Cell motility    04814 Motor proteins     108258691 (actb1)    04820 Cytoskeleton in muscle cells     108258691 (actb1)    04810 Regulation of actin cytoskeleton     108258691 (actb1)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     108258691 (actb1)    05100 Bacterial invasion of epithelial cells     108258691 (actb1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ipu03021]     108258691 (actb1)    03019 Messenger RNA biogenesis [BR:ipu03019]     108258691 (actb1)    03036 Chromosome and associated proteins [BR:ipu03036]     108258691 (actb1)    03029 Mitochondrial biogenesis [BR:ipu03029]     108258691 (actb1)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:ipu04812]     108258691 (actb1)    04147 Exosome [BR:ipu04147]     108258691 (actb1) Transcription machinery [BR:ipu03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      108258691 (actb1) Messenger RNA biogenesis [BR:ipu03019]  Eukaryotic type   mRNA surveillance and transport factors    Factors involved in mRNA localization     Factors that have mRNA localization signals      108258691 (actb1) Chromosome and associated proteins [BR:ipu03036]  Eukaryotic type   Histone modification proteins    HAT complexes     TIP60 complex      108258691 (actb1)     NuA4 complex      108258691 (actb1)   Chromatin remodeling factors    BAF complex     108258691 (actb1)    PBAF complex     108258691 (actb1)    GBAF(ncBAF) complex     108258691 (actb1)    SWR1 complex     108258691 (actb1) Mitochondrial biogenesis [BR:ipu03029]  Mitochondrial quality control factors   Mitochondrial dynamics    Actin cytoskeleton organization     108258691 (actb1) Cytoskeleton proteins [BR:ipu04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actins     Actins      108258691 (actb1) Exosome [BR:ipu04147]  Exosomal proteins   Proteins found in most exosomes    108258691 (actb1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Actin Motif Other DBs NCBI-GeneID:  108258691 NCBI-ProteinID:  XP_017312989 Ensembl:  ENSIPUG00000001566 UniProt:  A0A2D0Q3W3 LinkDB All DBs Position 26:707171..710898 Genome browser AA seq 375 aa AA seqDB search MDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS GGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ EYDESGPSIVHRKCF NT seq 1128 nt NT seq  +upstreamnt  +downstreamnt atggatgaggaaatcgctgctctggttgttgacaatggttccggtatgtgcaaagccggt tttgctggagatgatgctcctcgtgctgtcttcccttccatcgtcggccgtcccagacat cagggtgtgatggttggtatgggccagaaggattcctacgtaggagatgaggctcagagc aagagaggtatcctgactctgaagtaccccattgagcacggtattgttaccaactgggat gacatggagaagatctggcaccacaccttctacaatgagctgcgtgtggcccctgaggag cacccagtcctccttacagaggcccccctgaaccccaaagccaacagggagaagatgaca cagatcatgttcgagaccttcaacacacctgccatgtacgttgccatccaggctgtgctg tccctgtatgcttccgggcgtaccaccggtattgtgatggactccggagatggtgtcacc cacaccgtgcccatctatgagggttatgctctgccccacgccattctgcgtctggacctg gctggccgtgacctcacagactacctgatgaagatcctgaccgagcgtggctacagcttc accactacagctgagcgtgaaattgtgcgtgacatcaaggagaagctgtgctatgtcgct ctggacttcgagcaggagatgggcactgctgcatcttcatcctctctggagaagagctac gagctgcctgatgggcaggtcatcaccattggcaacgagcgtttccgctgccctgaagcc ctcttccagccctctttcctgggtatggagtcttgtggtatccatgagaccaccttcaac tccatcatgaagtgtgatgttgacatccgtaaggatctgtatgccaacactgtgctgtcc ggtggtaccaccatgtacccaggaatcgctgaccgcatgcagaaggagatcacctccctt gccccctccaccatgaagatcaagatcatcgctcctcctgagcgcaagtactctgtatgg atcggtggctccatcctggcctccctctccaccttccagcagatgtggatcagcaagcag gagtacgatgagtccggcccatccatcgtccacaggaagtgcttctaa

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