Ictalurus punctatus (channel catfish): 108258914
Help
Entry
108258914 CDS
T04658
Name
(RefSeq) fibrinogen beta chain
KO
K03904
fibrinogen beta chain
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108258914
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108258914
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
108258914
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108258914
Hyaluronan
Extracellular matrix or blood plasma proteins
108258914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
Fib_alpha
Cast
CC_BshC
HMMR_N
Fungal_TACC
UPF0449
Motif
Other DBs
NCBI-GeneID:
108258914
NCBI-ProteinID:
XP_017313408
Ensembl:
ENSIPUG00000024026
UniProt:
A0A2D0Q3X2
LinkDB
All DBs
Position
26:complement(79276..82897)
Genome browser
AA seq
491 aa
AA seq
DB search
MKFLLFLSVCVCGALAQANSDYDDEDAVDVKTPPPPKVELTDPRGHRPLSRGREVYTPVA
APPPVSGRGRYGPRPTAVTEKQLQEEKKEIIDSGGCIHASEAMGVLCPTGCELKTALLKQ
ERDVKPTVAQLKRDVETLSQTSNSVYRYVDELTSEVTERQRINNGNDDLVNQYTDDLEVQ
HAYVKETLDVSFPQNIKILQGVLEKLREKIQRLERTVTSQNEKCAEPCVVSCPIPVVSGK
DCEDVFRNGGETSELYLVRPEPSQAPYKVYCDQTTQNGGWLLIQNRLDGSVDFGRRWDDY
KRGFGNVAFDVGKGRCETPGEYWLGNDRISQLTKTGPTEVLIELQDWAGTKTYAQYQQFT
VQGEASNYILAVDKYSGTAGNALLTGATELFGVNRTMTIHNGMMFSTYDRDNDRWVPGDP
SKQCSREDGGGWWYNACHSANPNGRYYWGGAYTKNMAKHGTDDGVVWMNWKGSWYSLKAI
SLKIRPFFAQK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcctcctcttcctcagtgtgtgtgtgtgtggagcgctggctcaggccaattct
gattatgatgatgaagatgctgtagatgtaaaaacaccaccgccgcccaaagtggaactc
acagaccctcgaggtcacaggcctctttccaggggtcgtgaggtctacacacctgtcgct
gctccacctcctgttagcggacgtggacgttacggaccgcgccccactgcggtgaccgag
aaacagcttcaggaggagaagaaggaaattattgacagtgggggatgcatacatgcttcg
gaggcaatgggtgtgctctgtcctacaggctgtgaattgaaaacagctttgctgaagcag
gagcgtgacgttaaacctacggtggctcagctaaagagagacgtggaaactctgtcacag
acctccaactccgtctacagatacgtggacgagctgacctcagaggtcacagagagacag
aggatcaataacggtaatgacgacttggtcaatcagtacacagacgacctggaggtccag
catgcatatgtgaaagaaactctggatgtctcgtttccacaaaacattaaaatcctgcag
ggagtcctggagaaactgcgggagaagatccagcgtctggagaggactgtgacttctcag
aatgagaagtgtgctgaaccgtgtgtagtgtcctgccccatcccagtggtgtctggaaaa
gactgtgaggatgttttcaggaacggaggagaaacttctgagctgtatctggtgcgccca
gaaccctcacaagcaccttacaaggtctactgtgaccagacaacgcagaacggaggatgg
ctgctcattcagaaccgtttggacggtagcgtggacttcggccggagatgggatgattac
aagagaggttttggaaacgttgcgtttgatgttgggaaaggtcgctgcgaaactcctggc
gagtactggctcggtaatgaccgcatcagtcagctcactaagacgggcccaactgaagtc
ctgatcgagctgcaggactgggcaggcacgaagacatacgctcagtaccaacagttcacc
gtacaaggcgaggcttcgaactacatcctggcagtggataaatactccggcacggcggga
aatgccttactcactggcgcaacagagctgtttggtgtaaatcgcaccatgaccatccac
aacggcatgatgttcagcacctacgacagagacaatgaccgatgggtacctggtgacccg
tctaagcagtgttcaagagaagatggaggtggatggtggtataacgcctgccattcagcc
aatcctaatggccgatactactggggcggagcgtacacaaagaacatggccaaacacggc
acagacgacggcgtggtgtggatgaactggaagggctcgtggtactcgctcaaggccatc
agcctgaagatcagacccttctttgctcagaaataa
DBGET
integrated database retrieval system