Ictalurus punctatus (channel catfish): 108258914
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Entry
108258914 CDS
T04658
Name
(RefSeq) fibrinogen beta chain
KO
K03904
fibrinogen beta chain
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04517
IgSF CAM signaling
ipu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108258914
04518 Integrin signaling
108258914
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108258914
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108258914
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
108258914
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108258914
Hyaluronan
Extracellular matrix or blood plasma proteins
108258914
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrinogen_C
Fib_alpha
CEP152_CC1
Cast
YwqH-like
HMMR_N
PMD1-like
Fungal_TACC
CC_BshC
UPF0449
CENPU
Motif
Other DBs
NCBI-GeneID:
108258914
NCBI-ProteinID:
XP_017313408
Ensembl:
ENSIPUG00000024026
UniProt:
A0A2D0Q3X2
LinkDB
All DBs
Position
26:complement(79276..82897)
Genome browser
AA seq
491 aa
AA seq
DB search
MKFLLFLSVCVCGALAQANSDYDDEDAVDVKTPPPPKVELTDPRGHRPLSRGREVYTPVA
APPPVSGRGRYGPRPTAVTEKQLQEEKKEIIDSGGCIHASEAMGVLCPTGCELKTALLKQ
ERDVKPTVAQLKRDVETLSQTSNSVYRYVDELTSEVTERQRINNGNDDLVNQYTDDLEVQ
HAYVKETLDVSFPQNIKILQGVLEKLREKIQRLERTVTSQNEKCAEPCVVSCPIPVVSGK
DCEDVFRNGGETSELYLVRPEPSQAPYKVYCDQTTQNGGWLLIQNRLDGSVDFGRRWDDY
KRGFGNVAFDVGKGRCETPGEYWLGNDRISQLTKTGPTEVLIELQDWAGTKTYAQYQQFT
VQGEASNYILAVDKYSGTAGNALLTGATELFGVNRTMTIHNGMMFSTYDRDNDRWVPGDP
SKQCSREDGGGWWYNACHSANPNGRYYWGGAYTKNMAKHGTDDGVVWMNWKGSWYSLKAI
SLKIRPFFAQK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcctcctcttcctcagtgtgtgtgtgtgtggagcgctggctcaggccaattct
gattatgatgatgaagatgctgtagatgtaaaaacaccaccgccgcccaaagtggaactc
acagaccctcgaggtcacaggcctctttccaggggtcgtgaggtctacacacctgtcgct
gctccacctcctgttagcggacgtggacgttacggaccgcgccccactgcggtgaccgag
aaacagcttcaggaggagaagaaggaaattattgacagtgggggatgcatacatgcttcg
gaggcaatgggtgtgctctgtcctacaggctgtgaattgaaaacagctttgctgaagcag
gagcgtgacgttaaacctacggtggctcagctaaagagagacgtggaaactctgtcacag
acctccaactccgtctacagatacgtggacgagctgacctcagaggtcacagagagacag
aggatcaataacggtaatgacgacttggtcaatcagtacacagacgacctggaggtccag
catgcatatgtgaaagaaactctggatgtctcgtttccacaaaacattaaaatcctgcag
ggagtcctggagaaactgcgggagaagatccagcgtctggagaggactgtgacttctcag
aatgagaagtgtgctgaaccgtgtgtagtgtcctgccccatcccagtggtgtctggaaaa
gactgtgaggatgttttcaggaacggaggagaaacttctgagctgtatctggtgcgccca
gaaccctcacaagcaccttacaaggtctactgtgaccagacaacgcagaacggaggatgg
ctgctcattcagaaccgtttggacggtagcgtggacttcggccggagatgggatgattac
aagagaggttttggaaacgttgcgtttgatgttgggaaaggtcgctgcgaaactcctggc
gagtactggctcggtaatgaccgcatcagtcagctcactaagacgggcccaactgaagtc
ctgatcgagctgcaggactgggcaggcacgaagacatacgctcagtaccaacagttcacc
gtacaaggcgaggcttcgaactacatcctggcagtggataaatactccggcacggcggga
aatgccttactcactggcgcaacagagctgtttggtgtaaatcgcaccatgaccatccac
aacggcatgatgttcagcacctacgacagagacaatgaccgatgggtacctggtgacccg
tctaagcagtgttcaagagaagatggaggtggatggtggtataacgcctgccattcagcc
aatcctaatggccgatactactggggcggagcgtacacaaagaacatggccaaacacggc
acagacgacggcgtggtgtggatgaactggaagggctcgtggtactcgctcaaggccatc
agcctgaagatcagacccttctttgctcagaaataa
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