Ictalurus punctatus (channel catfish): 108258936
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Entry
108258936 CDS
T04658
Name
(RefSeq) radixin
KO
K05762
radixin
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04517
IgSF CAM signaling
ipu04530
Tight junction
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108258936
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108258936
09142 Cell motility
04810 Regulation of actin cytoskeleton
108258936
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108258936
04147 Exosome [BR:
ipu04147
]
108258936
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Ezrin/Radixin/Moesin
108258936
Exosome [BR:
ipu04147
]
Exosomal proteins
Proteins found in most exosomes
108258936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERM_C
ERM_helical
FERM_M
FERM_C
FERM_N
Motif
Other DBs
NCBI-GeneID:
108258936
NCBI-ProteinID:
XP_017313459
Ensembl:
ENSIPUG00000014559
UniProt:
W5UJ03
LinkDB
All DBs
Position
26:10471293..10513422
Genome browser
AA seq
578 aa
AA seq
DB search
MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYTDSKGYTTWLK
LNKKVTQQDVKKENPLQFKFRAKFFPEDVSEELIQEITQRLFFLQVKESILNDENYCPPE
TAVLLASYSVQAKYADYNKDIHKPGYLANDRLLPQRVLEQHKLTKEQWEERIQTWHEEHR
GMLREDSMMEYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDALGLNIYEHEDKLTPKIGF
PWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTI
EVQQMKAQAREEKHQKQMERAQLENEKKKRELAEKEKERIEREKDELIERLRQIEEQTAR
AQRELEEQTRRALELDQERQRAREEAERLERDKLAAEEARAALAKQAADQMKNQEQLAAE
LGEFTAKIALLEEAKRKKEEEANEWQHKAISAQEDLEKTKEELKTVMTVAVPAGSSAENE
HDEHDESSAEASAELSNDGVAHPHTEEDRLTEAQKNDRVKKQLQALSSELAQARDDSKKT
QNDMLHAENVKAGRDKYKTLRQIRQGNTKQRIDEFESM
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaccgatcaatgtacgggtgactacgatggacgccgagctggagtttgccatc
cagcccaacaccacaggcaaacagctctttgaccaggtggtgaagactgtggggctgcgt
gaagtctggtttttcgggttgcagtacacggacagtaagggttacaccacgtggctgaag
ctcaataagaaggtgactcagcaggatgtgaagaaggagaacccgctgcagttcaagttc
agagcaaagtttttcccagaggatgtttccgaagagctgatccaggagatcacacagcgc
cttttctttcttcaggtgaaggagtccattttgaacgatgagaattattgtcctcctgag
accgcagtgcttctggcgtcctactcggtccaggccaaatacgccgactacaacaaggac
atccacaagcctggctatcttgccaacgacaggcttctgccacagagagttctagagcaa
cacaaactgactaaagaacagtgggaggaaaggatacagacttggcatgaggagcataga
ggcatgctcagagaggactccatgatggagtatctgaaaatcgctcaggatctagagatg
tacggcgtcaactactttgagatcaagaataaaaaggggaccgagctgtggctgggagtg
gatgctctgggtctcaacatttacgaacacgaagacaagcttacaccaaagattggcttt
ccttggagcgaaatccgtaacatttccttcaacgacaagaaatttgtcatcaagcccatc
gataagaaagcaccagatttcgtgttctacgcgccacggttgcggatcaataaacggatc
ctggctctgtgcatgggtaaccacgagctttatatgaggaggagaaagccagataccatt
gaggtgcagcagatgaaggcccaagccagagaggagaaacaccagaaacaaatggagagg
gctcagcttgaaaacgaaaagaagaagcgtgagcttgcagaaaaggagaaggaaagaata
gagcgtgagaaggatgagctgatcgagcgactgcgacagattgaagagcaaacggcgaga
gcacagagagagctggaagaacagacacgtcgggctctagaactggaccaagaaaggcag
agggcaagagaagaggctgagagactggagagagataaactggcagccgaggaggcccga
gcagcgctggccaaacaagcagcagatcagatgaagaaccaggaacaactggctgcagaa
ctgggtgagttcaccgccaaaatcgccctgctggaggaggccaagagaaaaaaggaagag
gaggcaaatgaatggcagcacaaagctatttcagctcaggaggatctggagaagaccaaa
gaagagctgaagaccgtgatgaccgtggcagtaccagcaggcagctcggcagagaacgag
cacgatgagcacgacgagagcagcgccgaggccagcgccgagctctccaacgacggcgtg
gcgcatccacacaccgaggaagaccgtctcaccgaagcccagaaaaacgaccgtgtcaag
aagcagctccaagccctgagctcagagttggcgcaggcccgggacgactcgaagaagacg
cagaacgacatgctgcatgcggagaatgtcaaggccggccgcgacaagtacaagacgctg
cgccagatccggcagggaaacaccaagcagcgaatcgatgagttcgagtccatgtga
DBGET
integrated database retrieval system