Ictalurus punctatus (channel catfish): 108259104
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Entry
108259104 CDS
T04658
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108259104
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ipu04052
]
108259104
Cytokines and neuropeptides [BR:
ipu04052
]
Cytokines
Growth factors (RTK binding)
108259104
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Ortholog
Paralog
GFIT
Motif
Pfam:
NGF
NTF3_N
Motif
Other DBs
NCBI-GeneID:
108259104
NCBI-ProteinID:
XP_017313804
Ensembl:
ENSIPUG00000018109
UniProt:
A0A2D0Q667
LinkDB
All DBs
Position
27:13597188..13634929
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AA seq
274 aa
AA seq
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MGPLVRRPTLRNVKFQQVRRVMTILFLTMVISYFSCMRAAPMREVPGVVGGHRAEGYLGA
ARGHGTPPSGGALPSLTDTFEQVIEELLEVEGEAAQGQGGGGPGNAATAESKDVDTYASR
VMISNQVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPARRGELSVCDSISQWVTAVDK
KTAIDMSGQTVTVLEKVPVANGQLKQYFYETKCNPLGYTKEGCRGIDKRHYNSQCRTTQS
YVRALTMDSKRKIGWRFIRIDTSCVCTLTIKRGR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgggacctctggtccggcgcccaactcttcgcaacgtgaagttccaacaggtcagaaga
gtgatgaccatcctgttccttactatggttatttcatacttcagttgcatgagagctgcg
cccatgagagaggtgccgggcgttgtggggggccaccgagccgagggctacctgggggcc
gcccggggccatgggactccaccgagcgggggagctctgccctcgctcacggacacgttc
gagcaggtgatcgaggagctactggaagtggagggggaggcagcacagggccagggaggg
gggggccccggcaacgcagcaacggccgagtcaaaggacgtcgacacgtatgcatcgcgt
gtgatgatcagcaaccaagtgcctttggagccgccgctgctctttctcttggaggaatac
aaaaactacctggatgccgccaacatgtcgatgcgggtgcggcgccactcggacccggcg
cggcgtggcgagctcagcgtgtgcgacagtattagccagtgggtgacggccgtggacaaa
aagacggctatcgacatgtccggccagaccgtcaccgtgctggagaaggtcccggtggcc
aatgggcagctgaagcaatacttttacgagaccaaatgcaacccgctgggttacacgaag
gagggctgccgaggaatagacaagcggcactataactcgcaatgccggacaacccaatcg
tacgtgcgagccctcaccatggatagcaaacggaagatcggctggaggtttatacggata
gacacttcgtgtgtatgcacattgaccattaagagggggagatag
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