Ictalurus punctatus (channel catfish): 108259258
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Entry
108259258 CDS
T04658
Name
(RefSeq) ras GTPase-activating-like protein IQGAP1
KO
K16848
Ras GTPase-activating-like protein IQGAP1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04520
Adherens junction
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108259258
09142 Cell motility
04810 Regulation of actin cytoskeleton
108259258
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108259258
04147 Exosome [BR:
ipu04147
]
108259258
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
108259258
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108259258
Exosomal proteins of breast milk
108259258
Exosomal proteins of other body fluids (saliva and urine)
108259258
Exosomal proteins of colorectal cancer cells
108259258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
RasGAP_C
IQ
CH
WW
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
108259258
NCBI-ProteinID:
XP_017314045
Ensembl:
ENSIPUG00000022780
UniProt:
A0A2D0Q9J0
LinkDB
All DBs
Position
27:8800460..8852000
Genome browser
AA seq
1654 aa
AA seq
DB search
MSTSDEADGLRPRYGSVLDGVERLTAEEMDERRQQNMAYEYLCHLEEAKRWMEACLDEEL
PPTTELEEGLRNGVYLAKLGNFFAPHVVSLKRIYDREQTRYKATGLHFRHTDNVIQWLNA
MADKGLPKIFYPETTDIYDRKNMPRCIYCIHALSLYLFKLGLAPQITDLYGKVAFTEEEI
NNMKIELEKYNIQMPAFSKIGGILANELSVDEAALHAAVIAINDAIEHGDPAGTMAAMRN
PNAMLLNLDESAAQHYQDTLFQAKAEKVANSRKRIGENVEAERDVYEELLTQAEIQGNVN
KVNLSNSLTSVDQALYSGDEDKLYKVLSSPVLGLQSLKSKNKGWYLKQLAADREAKEQST
AGELLTKEELQNGVDAANSVADSYQRMLQALERINAAIRKGVPEETVNELMNPDAQLPAV
YPRAAELYQRELFSLQQQSPEGSLTHPELLVAVEMLSSVVLINEALDVGDRGAVWKQLSS
TVTGLSNVEGEYAQRYIDELLRLKAAAREESSDYLTWNDIQACVDQVNSTIQEEHERIAA
IGLINEALDEGDPKKTLEALQQPAAKLTDVDQSIAQHYFDKLLEARREKAHETQDPSAVL
WLDEIQEAIFQANRDTEEALQFSQAIQAINEAVDSGDATQTLAALRTPGSSLYGVTPECA
QTYQDDLTKIKNDKKKEGDNGSEWMKHWVKGGYNYYYNLKTREGTWDEPAGFAQNNTQLN
KDEIQSVVSGVTAAYNREQLWLANESLIAKLQARCRGFLVRRNLKERLNFLQTQDPAIRC
IQAHWKGYKEKKAFNERKQYLKDHTEDAVKIQSMVRMHQARKKYRDRLKYFKDHINEVVK
IQAFIRANKARDDYKTLINADDPPMAVVRKFVHLLDHSDQDFQEELELMRLREEVITNIR
SNQQLENDLNLMDIKIGLLVKNKITLQEVVSHSKKLTKKNKGELSNLMMMNKQKGGLKAL
SKEKRDKLEAYQYLFYLLQTNPTYLAKLIFQMPQNKSTKFMDSVIFTLYNYASNQREEYL
LLKLFKTALQEEIKSKVDQIQEIVTGNPTVIKMVVSFNRGARGQNALRQILSPVVKEIMD
DKTLNIKTDPVDIYKAWVNQMESQTGEASKLPYDVTPEQAMSHEEVRTRLEASIKNMRTV
TDKFLSAIVVSVDKIPYGMRFIAKVLKDTLNEKFPDATEDELLKIVGNLLYYRYMNPAIV
APDAFDIIDMSAGGQLTTDQRRNLGSIAKMLQHAASNKMFLGDNAHLNPINEYLTNSYQK
FRRFFLAACDVPSLEDKFNVDQYSDLVTVTKPVIYISIGEIINTHTLLLDHQDAIAPEHN
DPIHELLEDLGEVPTIESLIGENPLPPDDPNKEMMGKTEVSLTLTNKFDVPGEANAETDA
KTLLLNTKRLIVDVIRFQPGETLSEILDTAATPEQEVEYQRAMQRRAIRDAKTPEKMKQA
KPVVDDSLTLQGKKDKIKSNLQRLAELGKVQPENRFQDLINDIAKDIRNQRRYRQRRKAE
LVKLQQTNNALNTKTSFYNVQIDYYNQYIKTCMDNLAKGKVSKKPGENKAKKSKQASQKY
TAARLHEKGVLIEIEDLQTNQFKNVIFEISPSEAVGVFDVKAKFMGVHLETLMLEYQDLL
QLQYEGVAVMKLFDRATVNVNLLIFLLNKKFYGK
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacttcagatgaagcagacgggctgcggccgcgttatggctccgtgctggatggc
gtggagcggctcacggctgaggagatggatgagcggcgacagcagaacatggcctacgag
tacctgtgccacctggaagaggccaagcgctggatggaggcctgtttggacgaggagctt
ccccccaccaccgaactggaggaaggcctgcgaaatggcgtctacctggcaaagctcggc
aacttttttgccccacatgtcgtctccttgaagaggatctatgaccgtgaacagacacgc
tacaaggcaactgggctccacttcagacacacagacaatgtgatccagtggctgaacgct
atggctgataaaggccttcccaagatcttctatcctgagaccacagatatctacgacagg
aagaacatgccacgctgcatctactgcatccatgcgctcagcctgtacctgttcaagcta
ggcttagccccgcagatcacggacctgtacggcaaagtggccttcacagaggaggagatt
aacaacatgaagatcgagctggagaagtacaacattcagatgccagcttttagcaagatt
ggcgggatcctggctaacgagttatctgttgatgaggcagctttgcacgctgcagtgatc
gccatcaatgatgccatcgaacatggagaccctgcaggcacaatggccgccatgaggaac
cccaatgccatgctgcttaacctggacgagagtgccgcccagcactaccaagacacgctg
ttccaggccaaagctgagaaagtggccaattccaggaagaggatcggggagaacgtggaa
gcagaacgggacgtctatgaggagctgctcacccaggctgagattcagggcaatgtcaac
aaagttaacttgtccaattccctgacttcagtggatcaagcactatacagtggcgatgag
gacaagctctacaaggtgctttcgtcgccagtgttgggtctgcagtccctcaagtcaaag
aacaaaggatggtacctcaaacagctggcggcagaccgagaagctaaggagcagagcacc
gcaggagaattgctgaccaaagaagagctgcagaacggcgtggatgcagccaatagcgtt
gcagatagctatcagagaatgcttcaggccctagagcggataaatgcggccatcaggaaa
ggtgttcctgaggaaacggtgaacgagctgatgaatccagacgctcagctcccagccgtc
taccccagagccgctgagctgtaccagagagaactcttcagcctgcagcagcaaagccca
gagggttcactcacgcacccggaactgctggttgcggtagagatgctgtcgtcggtggtt
ctgataaacgaggctctggatgtgggagaccgaggtgccgtgtggaaacagctgagcagc
accgttacaggcctcagcaacgtggagggagagtatgcacaaaggtacatcgacgagttg
ttgcgcctgaaggccgcagcgcgagaagaaagcagcgactatctgacgtggaacgacatc
caggcgtgtgtggatcaggtcaacagcaccattcaagaggagcacgagagaatcgctgct
attggtctgatcaatgaggctctcgatgagggagacccaaagaagactctggaggcgctg
cagcaacctgcagccaagctgaccgacgtggatcagtcaatagctcagcattatttcgac
aaactcctggaggcgcggagagagaaagctcacgagactcaggatccatcagcagtgctc
tggctggatgaaatccaggaggccatcttccaagctaaccgagacaccgaagaggccctg
cagttctctcaggcaatccaagccattaatgaggctgtagacagtggggatgcgacccag
acgctggcagctctgcgcacacctggatccagtctgtatggcgtgaccccagagtgcgcc
cagacctatcaggatgacctgactaagatcaagaatgacaaaaagaaggagggtgataat
ggtagtgagtggatgaagcactgggtgaagggaggctacaactattactacaacctgaag
actagagagggcacatgggacgagcctgcaggatttgcgcagaacaatacccagctgaac
aaggatgagatccagtctgtcgtatcaggagtgaccgcagcctacaaccgcgagcagttg
tggttggctaatgagagtctgatcgctaaactgcaagcacgatgccgaggtttcctggtg
aggcgcaacctaaaagagcgtctcaacttcctgcagacccaggatccagccatcaggtgc
atccaggcccactggaagggttacaaagaaaaaaaggccttcaatgaaagaaaacagtac
ttgaaggatcacactgaagatgctgttaagatccagtcgatggttagaatgcaccaagct
cgcaaaaagtacagagatcgcctgaagtatttcaaagaccatattaatgaagtggtgaaa
atccaggcgtttatccgggccaacaaagcaagagatgactacaagactctcatcaacgca
gacgatcctccgatggcggttgtacgtaaattcgtgcacctgctggaccacagtgaccag
gacttccaggaagagctggaactgatgcgtctgagggaggaagtgatcaccaacatccgt
tccaaccagcagctggagaatgacctcaacctgatggacatcaagatcgggcttcttgtg
aagaacaagatcaccctgcaggaggtcgtgtcgcacagcaagaagctcaccaagaagaac
aagggcgagctgtccaacctcatgatgatgaacaagcagaagggaggactgaaggctctc
agtaaagaaaagcgagacaagctggaagcctatcagtaccttttctaccttttgcagact
aatcccacctacctggccaagctgatcttccaaatgccccagaacaagtccactaaattc
atggactctgtgattttcaccttgtacaactatgcgtccaaccagcgtgaagagtacctg
ctgctcaaactcttcaaaacagcactgcaagaggaaatcaaatcaaaagtggaccagatc
caggagattgtaactggaaaccccacggtcatcaaaatggtggtgagcttcaacagagga
gctcgcggtcagaacgctctgaggcagatcctgtctccggtcgtcaaagaaatcatggac
gacaagacgctaaacatcaaaactgaccccgtggacatttacaaggcctgggtgaaccag
atggagtctcagactggagaggccagcaagctgccttacgatgtcactccagagcaagcc
atgagccatgaagaggttcggacacgtctggaagcctccattaagaacatgcggacagtg
actgacaaattcctgtcagccatcgtggtttctgttgacaaaatcccttatggaatgcgt
ttcattgccaaagtgctgaaggatacacttaatgaaaagttccccgatgccacagaggat
gagcttttgaagattgttggaaacctgctgtattatcgctatatgaaccctgccattgtg
gctcctgatgcttttgacatcattgacatgtcagctggaggtcagctgaccaccgatcag
cggcgaaacctgggctccatcgccaaaatgctgcagcacgctgcttcaaataagatgttt
ctcggcgacaacgcccatcttaaccccatcaacgagtaccttaccaactcctaccagaaa
tttagacgtttcttcttggcagcttgtgacgtcccgtcactggaggataaatttaacgtg
gatcagtactcagacctggtcaccgtaaccaagccagttatttacatctccatcggcgag
atcatcaatacacacacgctcttgctagatcaccaggacgccatcgctcccgagcacaat
gatcccattcatgagctgctggaagatttgggagaggtgccaaccatcgagtctctgata
ggagagaatccactgccaccagatgaccctaacaaggaaatgatgggcaagacggaagtc
tctctcacccttaccaacaaatttgatgtccctggtgaagccaatgctgaaaccgatgcc
aagaccctccttctgaacaccaagaggctcattgtggacgtgatccggttccaaccagga
gaaacgctatccgaaatcctggacaccgcagcaactccggagcaggaggtggagtaccag
cgtgccatgcagagacgagccatccgtgacgccaagacacccgaaaagatgaaacaggcc
aaaccggtggtggatgacagtctcacactgcaaggcaaaaaggacaagattaagagcaac
cttcagaggctggcagagctggggaaagttcaaccagagaaccgattccaggatcttatc
aatgacattgctaaggacatcagaaatcagaggcggtatcgccagagaaggaaggccgag
ttggtgaagcttcagcagaccaataatgcccttaacacaaagaccagtttctacaacgta
cagattgattactacaaccagtacatcaagacctgcatggacaatctggccaagggcaaa
gtgtcaaagaagcctggagaaaacaaggcgaagaagagcaagcaggcttcacagaagtac
acagcagcacgtctgcatgagaagggagtgctgatcgagatcgaggatctgcaaaccaat
caattcaagaatgtcatttttgagatttctccatctgaggctgtgggagtgtttgatgta
aaagccaagttcatgggagtccatttggagacgctaatgttagagtaccaggatcttctg
cagttacagtacgagggcgtggccgtaatgaagctttttgatcgagccactgtcaacgtc
aacctgctcattttcctgcttaataagaaattctatggcaaatag
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integrated database retrieval system
