Ictalurus punctatus (channel catfish): 108259314
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Entry
108259314 CDS
T04658
Name
(RefSeq) sodium-dependent noradrenaline transporter
KO
K05035
solute carrier family 6 (neurotransmitter transporter, noradrenalin) member 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108259314
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108259314
Transporters [BR:
ipu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
108259314
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
108259314
NCBI-ProteinID:
XP_017314177
Ensembl:
ENSIPUG00000017028
UniProt:
A0A2D0Q645
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Position
27:complement(14353757..14381082)
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AA seq
615 aa
AA seq
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MNVQVMPEHKLASVAPLKPYAVEKKDVELILVKEHNGLQYTSSRTSTCTDMPERETWGKK
LDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLIPYTMFLFIAGMPLFYMELALGQYNRE
GAATVWKICPVFKGVGYTVIIIALYVGFYYNVIIAWSLYYLFSSFTSDLPWQHCNNTWNS
NMCKDPKLIKNISLLANATYAKYKRTPAAEFYEREVLRLHESQGIDDLKEPRWELSLCLV
VVIFILYFSLWKGVKSSGKVVYITATMPYIVLVVLLIRGITLPGAMNGIRAYLHIDLNKL
NNPQVWIEAATQIFYSLGAGFGVLIAFASYNKFDNNCYRDALLTSTINCITSFFSGFAIF
SVLGYMADKHGISIKEVATDGPGLVFIIYPEAISTLPGSTFFAIFFFIMLLTLGIDSSMG
GMEAVITGLSDDFKILRRNRKLFTFITAFGTFLVALLCITKGGIYVFTLLDHYAAGTSIL
FGVLVEAIGVSWFYGVDRFSEDIERMMGFKPGLYWRLCWKFVSPIFLLVVVIASIATSNT
MEYENYIFPSWATLVGWGIALSSMIFVPLYAIYKFLSVPGTFKQRIAYCITPEHEYHLVA
EGNVRQFKLKHWLAI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgcaggtgatgcccgagcacaagctggcgtcggtggcccctctcaaaccgtac
gccgtggagaagaaggatgtggagctcatcctggtcaaagagcacaacggtttgcagtac
acgagctcccgcacgagcacgtgcaccgatatgccggagcgcgagacttggggcaagaaa
ctggacttcctcctctctgtcatcggcttcgccgtggacctggccaacgtgtggaggttc
ccttatctgtgctataaaaacggcggaggagcctttctgatcccgtacaccatgttcctg
ttcatcgcgggaatgccgctgttttacatggagctggctttggggcagtataacagagaa
ggggcagccactgtgtggaagatctgccctgttttcaaaggtgtcggttataccgtgatc
atcatagctttgtatgtgggcttctactacaacgtcattatagcatggtctctgtactat
ctgttctcctcattcacgagtgatctgccctggcagcactgtaacaacacatggaacagc
aacatgtgcaaagaccccaagctcatcaaaaacatctctctcctggctaatgctacctac
gccaagtacaagcgaacgcctgctgctgagttctacgaacgagaagtactgcgcctccat
gagagtcaaggcatagatgacctgaaagaacctcgctgggagctgtccctttgccttgtg
gtggtcatctttattctctacttcagcctgtggaagggcgtaaagtcctctggaaaggtg
gtgtacatcactgccaccatgccctatattgtacttgtggtgctgctgatccgtggcatc
acactacctggtgctatgaacggaatccgtgcatacctccacattgacctcaataagctc
aacaatcctcaagtttggattgaagctgccactcagattttctactctcttggagctggt
tttggtgtgcttattgcctttgccagctacaataaatttgacaacaactgctatagggac
gccctcctgaccagcaccataaactgcatcaccagtttcttctcagggtttgccatcttc
tcagtgctgggctacatggctgataagcatggcatcagcattaaggaagtggccacagat
gggcctgggcttgtgttcatcatctacccggaggccatttccactctccctggctccact
ttctttgccatattcttcttcatcatgcttctaaccctaggcattgacagctctatgggt
ggcatggaagcagtcattactggactctcagatgatttcaagatcctaaggagaaacagg
aaattgttcaccttcatcactgcatttgggaccttcctggttgccttattgtgcattaca
aaaggagggatctatgtcttcaccctattagaccactatgctgcagggacatccattttg
tttggtgttcttgtggaggccataggagtgtcctggttctatggggtggacagattcagt
gaagacattgaacggatgatgggcttcaagccaggactctactggaggctttgctggaag
tttgtcagtcctatttttctgctggttgtggtgattgccagcattgccacttccaacact
atggaatatgaaaactacatctttcctagctgggctactttggtgggctggggcattgcc
ctttcctctatgatcttcgtaccactctatgccatctacaagttcctcagtgtgccaggc
accttcaagcagaggatagcgtactgtattacaccagagcacgaatatcatctggtggca
gagggaaacgtcaggcagttcaaactcaaacactggcttgccatttga
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