KEGG   Ictalurus punctatus (channel catfish): 108259440
Entry
108259440         CDS       T04658                                 
Name
(RefSeq) platelet-derived growth factor subunit A isoform X1
  KO
K04359  platelet-derived growth factor subunit A
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04010  MAPK signaling pathway
ipu04020  Calcium signaling pathway
ipu04510  Focal adhesion
ipu04518  Integrin signaling
ipu04540  Gap junction
ipu04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    108259440
   04020 Calcium signaling pathway
    108259440
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    108259440
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108259440
   04540 Gap junction
    108259440
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    108259440
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ipu04052]
    108259440
   00536 Glycosaminoglycan binding proteins [BR:ipu00536]
    108259440
Cytokines and neuropeptides [BR:ipu04052]
 Cytokines
  Growth factors (RTK binding)
   108259440
Glycosaminoglycan binding proteins [BR:ipu00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   108259440
SSDB
Motif
Pfam: PDGF_N PDGF
Other DBs
NCBI-GeneID: 108259440
NCBI-ProteinID: XP_017314449
Ensembl: ENSIPUG00000011860
UniProt: A0A2D0Q821
LinkDB
Position
27:2227338..2238865
AA seq 238 aa
MRAALCCLLACCCCCCCFSVPHAAAAATGEALIPRELIERLSNSEIRTMSDLQRLLELHT
AENEVVQETKRRYSKEHLDHNTNLKSSHTRPRHKRSIEEAVPAACKTRTEVYEIPRSQVD
PTAANFLIWPPCVEVARCSGCCNTSTMRCHASKKQHRSVKVAKIEYVRRKPKLREVQVQL
EDHLECVCMSKHHTESRLHTGHSRARDKKRKRIQEKSDKKKNLKKRTLSGLSLTLPPD
NT seq 717 nt   +upstreamnt  +downstreamnt
atgagagccgcgctctgctgcctcctcgcgtgctgctgctgctgctgctgcttctccgtg
ccgcacgccgccgccgccgcaaccggggaggcgctgattcctcgagagctcatcgagaga
ctgtccaacagcgagatccgcaccatgagtgacctccagcggcttctggagttgcacact
gcagagaacgaggtggttcaggagactaaacggcgctacagcaaagaacatctcgaccac
aacaccaacctcaagagctcacacacacgcccgagacacaagaggagcattgaggaagca
gtcccggctgcgtgcaagactcggacggaggtgtacgagatcccacgttctcaggtggac
cctacagctgcgaacttcctcatctggccaccatgcgtagaggtggcacggtgctcaggc
tgctgcaacaccagcaccatgcgctgccatgctagcaaaaaacaacaccggagtgtcaag
gtggctaagatcgagtatgtgcgtcgcaaaccgaaactgcgggaggtgcaggtgcagctg
gaggatcatctggagtgtgtgtgcatgtccaaacaccacacagagtcccgcttacacaca
ggccactctagggcgagagataaaaagaggaaaaggatacaggaaaagtcggacaaaaaa
aaaaatctgaaaaagcgtacactttcgggtcttagtctaacgttgccgccagactga

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