Ictalurus punctatus (channel catfish): 108259440
Help
Entry
108259440 CDS
T04658
Name
(RefSeq) platelet-derived growth factor subunit A isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04020
Calcium signaling pathway
ipu04510
Focal adhesion
ipu04540
Gap junction
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108259440
04020 Calcium signaling pathway
108259440
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108259440
04540 Gap junction
108259440
09142 Cell motility
04810 Regulation of actin cytoskeleton
108259440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ipu04052
]
108259440
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108259440
Cytokines and neuropeptides [BR:
ipu04052
]
Cytokines
Growth factors (RTK binding)
108259440
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Growth factors/receptors
108259440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
Motif
Other DBs
NCBI-GeneID:
108259440
NCBI-ProteinID:
XP_017314449
Ensembl:
ENSIPUG00000011860
UniProt:
A0A2D0Q821
LinkDB
All DBs
Position
27:2227338..2238865
Genome browser
AA seq
238 aa
AA seq
DB search
MRAALCCLLACCCCCCCFSVPHAAAAATGEALIPRELIERLSNSEIRTMSDLQRLLELHT
AENEVVQETKRRYSKEHLDHNTNLKSSHTRPRHKRSIEEAVPAACKTRTEVYEIPRSQVD
PTAANFLIWPPCVEVARCSGCCNTSTMRCHASKKQHRSVKVAKIEYVRRKPKLREVQVQL
EDHLECVCMSKHHTESRLHTGHSRARDKKRKRIQEKSDKKKNLKKRTLSGLSLTLPPD
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcgctctgctgcctcctcgcgtgctgctgctgctgctgctgcttctccgtg
ccgcacgccgccgccgccgcaaccggggaggcgctgattcctcgagagctcatcgagaga
ctgtccaacagcgagatccgcaccatgagtgacctccagcggcttctggagttgcacact
gcagagaacgaggtggttcaggagactaaacggcgctacagcaaagaacatctcgaccac
aacaccaacctcaagagctcacacacacgcccgagacacaagaggagcattgaggaagca
gtcccggctgcgtgcaagactcggacggaggtgtacgagatcccacgttctcaggtggac
cctacagctgcgaacttcctcatctggccaccatgcgtagaggtggcacggtgctcaggc
tgctgcaacaccagcaccatgcgctgccatgctagcaaaaaacaacaccggagtgtcaag
gtggctaagatcgagtatgtgcgtcgcaaaccgaaactgcgggaggtgcaggtgcagctg
gaggatcatctggagtgtgtgtgcatgtccaaacaccacacagagtcccgcttacacaca
ggccactctagggcgagagataaaaagaggaaaaggatacaggaaaagtcggacaaaaaa
aaaaatctgaaaaagcgtacactttcgggtcttagtctaacgttgccgccagactga
DBGET
integrated database retrieval system
