Ictalurus punctatus (channel catfish): 108260487
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Entry
108260487 CDS
T04658
Symbol
gria2a
Name
(RefSeq) glutamate receptor 2a isoform X1
KO
K05198
glutamate receptor 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108260487 (gria2a)
04082 Neuroactive ligand signaling
108260487 (gria2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108260487 (gria2a)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Glutamate (ionotropic)
108260487 (gria2a)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
DUF2061
Motif
Other DBs
NCBI-GeneID:
108260487
NCBI-ProteinID:
XP_017316310
Ensembl:
ENSIPUG00000001923
UniProt:
A0A2D0QG12
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Position
29:2420400..2457431
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AA seq
895 aa
AA seq
DB search
MMNLSGFLLVPALWGLALGGSPSVQIGGLFPRGADQEYSAFRVGMVQFGTAEFRLTPHID
NLEVANSFAITNCFCSQFSRGVYAIFGFYDKKSVNTITSFCETLHVSFITPSFPADGLNQ
FVLQMRPDIRGPLISLVEYYKWEKFAYLYDSDRGLSTLQAVLDTAAEKKWQVTAINVGNL
KDERKDEAYRSLFQDLENKKERRVILDCEQDKVKDIMEQVITIGRHVKGYHYIIANFGFL
DGDLSKIQYGGANVSGFQIVDFDDPLVAKFDQRWEALEEKEYPGADSKIRYTSALTYDAV
QVMTEAFRFLHKQRIDISRRGNNGDCLANPAVPWAQGVEIERALKQVRVDGLTGNIQFDQ
YGKRVNFSVNIMELKNSGPVKIGYWKEVDKMVVTKSDLFPNDTFGMENKTVIVTTILEAP
YVMLKKNAELFTDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDADTKIWNGMV
GELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYE
IWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEFEDGQLGPSESNNEFGIFNSLWFSLGAFM
QQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI
AYGTLDAGSTKEFFKRSKIALFEKMWQYMKSAEPSVFVKNTVEGVLRVRKSKGKYAYLLE
STMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNAVNLAVLKLNEQGLLDKLKNK
WWYDKGECGSGGGESKEKTSALSLSNVAGVFYILVGGLGLAMLVALVEFCYKSRAEAKRM
KMTFTEAMRTKARLSITGSIGENGRVLTPDFSKAVHAVPYMRPGMAMPLNVSELS
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatttgtcgggtttcctgttggtacccgctttatggggactcgcactcggtgga
tccccgagcgtccaaataggcggcctgtttccgcgcggtgcggatcaggagtacagcgcg
tttcgggtcgggatggtgcagttcggcaccgccgagttccgcctcaccccgcacatcgac
aacctggaggtggccaacagcttcgccatcaccaactgcttctgttcgcagttttcccgg
ggcgtctacgccatcttcggcttctacgataagaagtccgtgaacaccatcacgtcgttc
tgcgagacgctgcacgtgtccttcatcacgccgagtttccccgccgacggcctcaaccag
ttcgtgctgcagatgaggcctgacatccgcggccctctgatcagcctggtcgagtactac
aagtgggagaagtttgcgtatctgtacgacagtgatagaggcttgtccactttgcaggcc
gtcctggacacggcggctgagaagaaatggcaggtgacggctataaacgtgggcaacctg
aaggacgagaggaaagacgaggcctaccgctcgctcttccaggacctggagaataagaaa
gagaggagagtgatcctggactgcgagcaggacaaggtcaaagacatcatggagcaggtc
atcacgatcggtcgtcatgtgaaaggatatcattacatcatcgctaattttggctttttg
gacggagacctatcgaagattcagtatgggggcgcgaacgtgtccggctttcagatcgtg
gatttcgacgaccctctcgtcgctaagttcgatcagcgctgggaggctctggaggagaaa
gagtaccccggggcagacagcaagatccgatacacctctgctttgacgtacgatgcggtt
caagtgatgaccgaagccttccgcttcctccacaagcaaaggatcgacatcagtcgtcgt
ggcaacaacggggactgcctggccaatccggctgtaccgtgggctcaaggggtggagata
gaacgtgctcttaagcaggtgcgagtggacggactgacaggaaacatccagttcgaccaa
tacggcaagagagtgaacttctcagtcaacatcatggagctgaaaaacagcgggccagta
aagattggctactggaaagaggtggacaaaatggtggtcaccaaatccgacctcttcccc
aacgacacctttgggatggagaacaagacggttatcgtgacgaccatcttggaggcaccg
tatgtgatgttaaagaagaacgcagagttgttcacggataacgaacgctacgagggatac
tgcgtggacctggcggctgagatcgcaaagcattgcgggtttaagtatcagctgaagatt
gtgggagacgggaagtacggcgctagagacgcagatacgaagatctggaatggcatggtt
ggcgaattggtgtacgggaaagcggacatagccgtagcgcctctgacgatcacgctggtc
cgtgaagaggtgatcgacttctccaagcccttcatgagcctgggaatctccatcatgatc
aagaaaccgcagaaatccaagccgggcgtcttctccttcctggacccgctggcctatgag
atctggatgtgcatcgtgttcgcctacatcggcgttagcgtcgtgctcttcctcgttagc
cgctttagcccgtacgagtggcacaccgaggagttcgaggacggccagctcgggcccagc
gagtccaataacgaatttgggatctttaatagtctgtggttttctctgggcgcttttatg
cagcagggatgcgatatttcgccaaggtcactatctgggcgtatagttggtggtgtgtgg
tggttcttcaccctcatcattatctcatcttacacggccaacctggctgctttcctcacc
gtggagaggatggtgtcccccatcgagagcgccgaggatctcgccaagcagaccgaaatc
gcctatggaacccttgatgccggttcaaccaaagagttcttcaagagatcaaagatcgcc
ctgtttgagaagatgtggcagtacatgaaaagcgccgagccttctgtctttgtgaagaac
acggtggaaggcgtgctgcgtgttcgcaagtccaagggcaaatacgcctacctgctggag
tccaccatgaacgagtacatcgagcagcgcaagccgtgtgacaccatgaaggtcggaggc
aatctcgactccaagggctacggcatcgccacgcccaaaggatctgctttaagaaacgcg
gtaaaccttgcggtgctaaaactgaacgagcaggggcttctggataaattgaaaaacaaa
tggtggtacgacaaaggagagtgcggcagcggaggcggggagtcaaaggagaagacgagc
gctctgagcttgagcaacgttgcgggggtcttctacatcctggtgggcggcctcggcctg
gccatgctggtggcgctggtggagttctgctacaagtcgcgtgctgaggccaagcgcatg
aagatgacgttcaccgaggccatgcgcactaaggccaggctttctataactggcagtatt
ggggagaacgggagagtgctgactccggatttctctaaagccgtgcacgctgtgccctac
atgagaccaggcatggcaatgcctcttaacgtgagcgagctgtcctga
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