Ictalurus punctatus (channel catfish): 108260544
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Entry
108260544 CDS
T04658
Symbol
lgi1a
Name
(RefSeq) leucine-rich glioma-inactivated protein 1
KO
K25428
leucine-rich repeat LGI family member 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
108260544 (lgi1a)
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRRCT
Motif
Other DBs
NCBI-GeneID:
108260544
NCBI-ProteinID:
XP_017316417
Ensembl:
ENSIPUG00000007440
UniProt:
A0A2D0QDN0
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Position
29:7425099..7438732
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AA seq
543 aa
AA seq
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MDVVSARSFCLLCVVALVLLSALVAEGKRRSTRCPPTCTCTKDTALCSSSSSIPRGFPPD
VISLSFVKSSFSEIPKESFIHTPALHLLLFTANVFESINEDAFLGLPHLEYLFIENNQIK
SISPFAFRGLKSLIHLSLAFNNLESLPKDLFKWVDTLTKVDLRGNLFTCDCKLKWLVDWI
YHTNATVDQIYCNSPPAYQGKKINDLTPQSFDCITTDFSLLKSLEFQSISVETFTFGGDQ
YVVFAQPFIGRCSFMEWDHVQMEFRNFDNITSTSTVICKPLVIDDQLFVVVAQLFGGSHI
YKRDISANKFIKIQDIDILKIRKPNDVEVFRLDGESFFVIADSSKAGSTTVYKWNGNGFY
SHQSLHPWYRDTDVEHLEISGKPHLILSSSSQRPVVYQWNRSSKLFERRTDIPEMEDVYA
VKHFQVKGELYVCLTRFIGDSKVMKWDGAMFEEVQSVPSRGSMVFQPFAVADWQYAILGS
DYSFTQVYRWDAKKGQFIHFQELNIQAPRAFSLVSIDNREFLLASSFKGQTRIYEHLILD
LSD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggttagcgcgcgaagcttttgcttgctctgcgtggtcgcgctcgtgttgctc
tccgcgctggtagctgaaggcaagaggcggtcgacgcgctgtcccccgacctgcacgtgc
accaaagacaccgcgctgtgctcgagcagctcctccattccgcgcggcttccctcccgac
gtcatctcactatcctttgtgaagtccagcttcagtgaaatccccaaggagagcttcatt
cacaccccagcactccacctcctacttttcacagccaacgtgttcgagtccataaatgag
gacgccttccttggtcttccacatttggaatacctgtttattgaaaataatcaaatcaag
tctatatcaccttttgccttccgaggtcttaagtccttaatacacttgagccttgccttc
aacaatctggagtctctgccaaaagatctctttaaatgggtggacactttgacaaaagtt
gacttgcgtggaaatctgttcacctgtgattgcaaactgaagtggctggtggactggatt
taccacacgaacgcaaccgtagaccagatatactgcaacagccctccagcctatcaagga
aagaaaatcaacgatcttactccgcagtcatttgactgcataacaacggatttttccctg
ctgaagtctctcgagttccagtccatttcagtggagacatttacttttggtggtgaccag
tatgtggtgtttgcccagcctttcattggaagatgtagctttatggaatgggaccatgtt
caaatggaatttcggaattttgacaatattacgagcacctccactgttatttgcaaacct
ctggtgatcgatgaccagctgtttgttgtagtggctcagctctttggtggctcacatatc
tacaagcgagacatctccgccaacaagttcatcaaaatccaagacattgacatcctaaaa
atccgcaagcctaatgatgtggaggtgttccgcttggatggagaatccttctttgtcatt
gctgacagctccaaagctggttctaccaccgtgtacaagtggaacggcaacggcttttac
tcacaccagtcgctgcacccgtggtaccgtgacactgacgtggaacatctggaaatttct
ggcaagccacacctgatcttatccagcagctcgcaacggcctgtcgtctaccagtggaac
aggagctccaagctgtttgagaggcgtactgacatccctgaaatggaggatgtctatgct
gtgaagcactttcaagtgaaaggtgagctctatgtgtgcctaacacgcttcattggtgac
tccaaggtgatgaaatgggacggcgccatgtttgaagaggtccagagtgtgccctcacga
ggttccatggtcttccagccgtttgcggtggcggactggcagtacgccatcctgggcagt
gattactccttcactcaggtgtaccgctgggatgccaagaaaggccagttcattcacttc
caagagctcaacatccaggccccacgagcattctcactggtgtccattgataatcgagag
ttcctcctggcatccagttttaaggggcaaacacgcatatatgaacacttgatccttgac
ttgagtgattga
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