Ictalurus punctatus (channel catfish): 108260652
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Entry
108260652 CDS
T04658
Name
(RefSeq) F-box/WD repeat-containing protein 7 isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108260652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108260652
04121 Ubiquitin system [BR:
ipu04121
]
108260652
Membrane trafficking [BR:
ipu04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
108260652
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108260652
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
EIF3I
WDR55
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_SCAP
DSE1_N
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
F-box-like
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
ASA1
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
F-box
Beta-prop_Aladin
Beta-prop_ACSF4
Beta-prop_NOL10_N
CFAP251_N
PAC11
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IFT140_1st
Ge1_WD40
Beta-prop_RIG_1st
KNTC1_N
Beta-prop_LRRK2
WD40_like
PQQ_2
Beta-prop_NWD2_C
eIF2A
CDtoxinA
TRM82_WD
PALB2_WD40
Beta-prop_pof12
Beta-prop_WDR19_2nd
Vts1
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
108260652
NCBI-ProteinID:
XP_017316568
Ensembl:
ENSIPUG00000013504
UniProt:
A0A2D0QD17
LinkDB
All DBs
Position
29:13006463..13119944
Genome browser
AA seq
752 aa
AA seq
DB search
MNQDLLVPEPAPEPEPEPGHMNREREPQQQRGERGEEDEEEDDEEEEEEERERSGEAEEA
EEEPWPSGRESVSRNEGAEEGRREEVNGGEKAVQWLWEQEQRRRRRRPRNDDEEENNNHG
EGDGGERRVRTGLRAEEDEEDGEREEEEEMDQESDEFEASEDSAREEDEEAEEDEEGETG
LHSSPVKTGATNPKENADVQSGRQNQSSSSSQHTHPQMKRKLDHGPEVRPFPSGKKPCPS
PTGLVPYPSTPTTFGDLRAANGQGQQRRRITSIQPPTGLQEWLRTFQSWSGPEKLLALDE
LIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILA
EDNLLWREKCREEGIDEPLHIKRRKVVKPGFSHSPWKSAYIRQHRIDTNWRRGEIKSPKV
LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII
SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIDSGQCLH
VLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGVHVV
SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQ
TLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLWDLRSGDFIRNLVSLESGGSGGVVWRI
RASNVKLVCAVGSRNGTEETKLLVLDFDVELK
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggacctgctggttcccgaacccgcgccggagccagaacctgaacccggacac
atgaaccgcgagcgagaacctcagcaacagaggggcgagcgaggagaggaggatgaggag
gaggacgacgaagaggaggaggaggaggagcgagagcgatccggagaggcggaagaagcg
gaagaggagccctggccttcggggagggagtcggtgagccggaacgagggagcggaagaa
ggcaggagagaggaggtgaatggcggagagaaagccgtccagtggttgtgggagcaggag
cagaggagacggcggcggagaccgaggaacgacgacgaggaggagaacaacaaccacggc
gaaggagatggaggagaaagacgggtacggacaggactgcgcgccgaggaagacgaggag
gacggagagagagaggaggaggaagagatggaccaggagagcgatgagtttgaagcgtcg
gaggacagcgcgagagaggaggacgaggaagcagaggaggatgaggaaggagagacggga
cttcactcttctccggtcaaaaccggagcgacgaatccgaaagagaacgccgacgtccaa
tcaggacgacagaaccaaagctcatcttcatctcagcacacgcatcctcagatgaagagg
aagttggaccatggacccgaagttcggccgttcccttcaggcaaaaagccctgtccgagt
ccgacgggtttggtcccgtatccatccacccccactacattcggcgacctgagagctgct
aacggacagggacagcagagacgccgcatcacctccatccagcctccgacgggcttacag
gaatggctccgtaccttccagagttggagcgggccggagaagctcttggcgctggacgag
ttgattgacagctgtgagccgacgcaggtgaagcacatgatgcaggtgatcgagccacag
ttccagagagacttcatctccctactgcccaaagagttggctctgtatgttctgtccttc
ttggagccgaaggatttgctccaggccgctcagacgtgtcgatactggcgaatcctggcg
gaggacaacctgctctggagagaaaaatgcagagaggaaggtatcgacgagccgttacac
atcaagaggaggaaggtggtgaagccaggattcagtcacagcccgtggaagagcgcctac
atcagacagcaccgcatcgacaccaactggaggagaggagagatcaaatcacctaaggtg
ttgaaaggacacgacgatcacgtaatcacatgtctgcagttttgtgggaatcgtattgtt
agcggttcagacgataacacgctcaaagtgtggtctgcagtcacgggaaagtgtttgagg
acgttggtcgggcacacgggcggcgtttggtcctctcagatgcgagacaacatcatcatc
agcggctcgacggatcgaactctgaaggtgtggaacgcggagacgggagagtgcattcac
acgctgtacggacacacgtccaccgtgcgctgcatgcacctccacgaaaagagggtggtg
agcgggtctcgggacgcgacgctgcgcgtatgggatatcgactcgggtcagtgtttgcac
gtgttgatgggtcacgtggcggcggtgcgctgcgtgcagtacgacggacgccgcgtcgtc
agcggagcctacgacttcatggtcaaagtgtgggaccccgagaccgagacgtgcttacac
acactgcagggacacaccaaccgggtctactcactacagttcgacggcgtccacgtggtc
agcggttctttagacacgtccatccgcgtgtgggacgtggaaacggggaactgcatacac
acgctcacgggtcatcagtccctcaccagcggcatggagctgaaagacaacatcctggtg
tcgggcaacgccgactcgacggtcaaaatctgggacataaagacgggacagtgtctccaa
acgctgcaaggtcctcataagcaccagagcgccgtgacgtgtctgcagttcaacaagaac
tttgtgatcacgagttcggacgacggcacggtgaagctgtgggatttgcgctcgggagat
ttcatccggaacctggtgagcctggagagcggcggcagcggcggagtcgtgtggaggatc
cgagcctccaacgtgaagctggtgtgcgccgtgggcagcaggaacggcaccgaggagacc
aaactgctcgtgctcgacttcgacgtcgaactcaagtga
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integrated database retrieval system
