KEGG   Ictalurus punctatus (channel catfish): 108260689
Entry
108260689         CDS       T04658                                 
Name
(RefSeq) beta-1,4-galactosyltransferase 1
  KO
K07966  beta-1,4-galactosyltransferase 1 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu00052  Galactose metabolism
ipu00510  N-Glycan biosynthesis
ipu00513  Various types of N-glycan biosynthesis
ipu00514  Other types of O-glycan biosynthesis
ipu00515  Mannose type O-glycan biosynthesis
ipu00533  Glycosaminoglycan biosynthesis - keratan sulfate
ipu00601  Glycosphingolipid biosynthesis - lacto and neolacto series
ipu01100  Metabolic pathways
Module
ipu_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
ipu_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    108260689
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    108260689
   00513 Various types of N-glycan biosynthesis
    108260689
   00515 Mannose type O-glycan biosynthesis
    108260689
   00514 Other types of O-glycan biosynthesis
    108260689
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    108260689
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    108260689
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:ipu01003]
    108260689
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108260689
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ipu04147]
    108260689
Enzymes [BR:ipu01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     108260689
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     108260689
    2.4.1.90  N-acetyllactosamine synthase
     108260689
Glycosyltransferases [BR:ipu01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   108260689
Membrane trafficking [BR:ipu04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    108260689
Exosome [BR:ipu04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   108260689
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C Glyco_tranf_2_2
Other DBs
NCBI-GeneID: 108260689
NCBI-ProteinID: XP_017316625
UniProt: A0A2D0QGS2
LinkDB
Position
29:702364..711003
AA seq 360 aa
MREFPRCLLNRRSPLLVVVCVLAVMFFYMLHFDTSRVMTLPFTRYRELTSVPVTSARNNS
VPSARNNSVPSARNSSVPTVDTQSNQLQQYCPETPPKLDGPLYVDFSEPVNLDSLLKDTR
LSLGGRFTPSECVSQQKVALIIPFRDRELHLKIWLFYMHPILQRQQLDYGIYIIEQDGDE
TFNRAKLLNVGYVEALKEYDYNCFVFSDVDLIPTDDRNLYKCYDQPRHLSVAMDKFGFKL
PYNQYFGGVSALSKEQYLKINGFPNNYWGWGGEDDDVFNRLTLRGMSISRPDHNIGRCKM
IRHARDKLNQPNPHRFSRISRTKQTMDTDGINSLNYTVVGWEKTRLYTKIIADIGTPPSL
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgagggagtttcccaggtgtctgttgaaccgcaggagcccgctgctggtggtcgtgtgt
gtgctcgcggtgatgttcttctacatgctgcacttcgacacttcgcgcgtcatgacattg
ccgttcacgcggtatcgcgagctcaccagcgtcccggtgaccagcgcgcgcaacaacagt
gtacccagcgcgcgcaacaacagtgtacccagcgcgcgcaacagcagtgtaccgacagtg
gacacgcagagcaatcaactccaacagtactgtcccgagactcctccgaagttagatggg
ccgctgtatgtggatttttccgagccggtgaacttggacagtttgctgaaggacactcgt
ctgtctctgggtggacgcttcacgccgagcgagtgtgtgtctcaacagaaggtggcgctc
atcatcccattcagagacagagagctgcacctgaagatctggctcttctacatgcacccc
atactgcagagacagcagctcgactacggcatctacatcatcgagcaggacggggatgaa
acgtttaaccgagcgaagctgttgaacgtgggctacgtggaggctctgaaggagtacgat
tacaactgtttcgtcttcagcgacgtcgatctcatccccacagacgaccgaaacctctac
aagtgctacgaccagccgagacacctctctgtggccatggacaaattcggcttcaagtta
ccatataatcagtatttcggtggtgtgtctgctctaagtaaagaacaatacctgaagatc
aatggcttcccaaataactactggggctgggggggtgaggatgatgatgtcttcaaccgc
ttgacgcttcggggaatgtccatctcccgacctgatcacaacatcggcaggtgtaagatg
attcgtcatgcgagagacaagctgaaccaacccaatcctcataggttctcccgaatctcc
cgtacgaaacagacgatggacacagacggcatcaactcgctcaactacaccgtggtgggc
tgggagaaaacccggctgtacaccaaaatcatcgcggacatcggaacgcctccgagttta
taa

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