Ictalurus punctatus (channel catfish): 108260689
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Entry
108260689 CDS
T04658
Name
(RefSeq) beta-1,4-galactosyltransferase 1
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00052
Galactose metabolism
ipu00510
N-Glycan biosynthesis
ipu00513
Various types of N-glycan biosynthesis
ipu00514
Other types of O-glycan biosynthesis
ipu00515
Mannose type O-glycan biosynthesis
ipu00533
Glycosaminoglycan biosynthesis - keratan sulfate
ipu00601
Glycosphingolipid biosynthesis - lacto and neolacto series
ipu01100
Metabolic pathways
Module
ipu_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
ipu_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
108260689
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
108260689
00513 Various types of N-glycan biosynthesis
108260689
00515 Mannose type O-glycan biosynthesis
108260689
00514 Other types of O-glycan biosynthesis
108260689
00533 Glycosaminoglycan biosynthesis - keratan sulfate
108260689
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
108260689
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ipu01003
]
108260689
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108260689
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108260689
Enzymes [BR:
ipu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
108260689
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
108260689
2.4.1.90 N-acetyllactosamine synthase
108260689
Glycosyltransferases [BR:
ipu01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
108260689
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
108260689
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of breast milk
108260689
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
108260689
NCBI-ProteinID:
XP_017316625
UniProt:
A0A2D0QGS2
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All DBs
Position
29:702364..711003
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AA seq
360 aa
AA seq
DB search
MREFPRCLLNRRSPLLVVVCVLAVMFFYMLHFDTSRVMTLPFTRYRELTSVPVTSARNNS
VPSARNNSVPSARNSSVPTVDTQSNQLQQYCPETPPKLDGPLYVDFSEPVNLDSLLKDTR
LSLGGRFTPSECVSQQKVALIIPFRDRELHLKIWLFYMHPILQRQQLDYGIYIIEQDGDE
TFNRAKLLNVGYVEALKEYDYNCFVFSDVDLIPTDDRNLYKCYDQPRHLSVAMDKFGFKL
PYNQYFGGVSALSKEQYLKINGFPNNYWGWGGEDDDVFNRLTLRGMSISRPDHNIGRCKM
IRHARDKLNQPNPHRFSRISRTKQTMDTDGINSLNYTVVGWEKTRLYTKIIADIGTPPSL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagggagtttcccaggtgtctgttgaaccgcaggagcccgctgctggtggtcgtgtgt
gtgctcgcggtgatgttcttctacatgctgcacttcgacacttcgcgcgtcatgacattg
ccgttcacgcggtatcgcgagctcaccagcgtcccggtgaccagcgcgcgcaacaacagt
gtacccagcgcgcgcaacaacagtgtacccagcgcgcgcaacagcagtgtaccgacagtg
gacacgcagagcaatcaactccaacagtactgtcccgagactcctccgaagttagatggg
ccgctgtatgtggatttttccgagccggtgaacttggacagtttgctgaaggacactcgt
ctgtctctgggtggacgcttcacgccgagcgagtgtgtgtctcaacagaaggtggcgctc
atcatcccattcagagacagagagctgcacctgaagatctggctcttctacatgcacccc
atactgcagagacagcagctcgactacggcatctacatcatcgagcaggacggggatgaa
acgtttaaccgagcgaagctgttgaacgtgggctacgtggaggctctgaaggagtacgat
tacaactgtttcgtcttcagcgacgtcgatctcatccccacagacgaccgaaacctctac
aagtgctacgaccagccgagacacctctctgtggccatggacaaattcggcttcaagtta
ccatataatcagtatttcggtggtgtgtctgctctaagtaaagaacaatacctgaagatc
aatggcttcccaaataactactggggctgggggggtgaggatgatgatgtcttcaaccgc
ttgacgcttcggggaatgtccatctcccgacctgatcacaacatcggcaggtgtaagatg
attcgtcatgcgagagacaagctgaaccaacccaatcctcataggttctcccgaatctcc
cgtacgaaacagacgatggacacagacggcatcaactcgctcaactacaccgtggtgggc
tgggagaaaacccggctgtacaccaaaatcatcgcggacatcggaacgcctccgagttta
taa
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