Ictalurus punctatus (channel catfish): 108261176
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Entry
108261176 CDS
T04658
Symbol
trpc5a
Name
(RefSeq) short transient receptor potential channel 5a
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108261176 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108261176 (trpc5a)
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108261176 (trpc5a)
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108261176 (trpc5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
108261176
NCBI-ProteinID:
XP_053543872
UniProt:
A0A9F7TRV9
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All DBs
Position
18:complement(10572695..10700263)
Genome browser
AA seq
1020 aa
AA seq
DB search
MNPMAQLYYKKASYSPYRDRIPLQIVRAEAELSTEERAYLSAVEKGDYAGVKMALEQAEI
YYNINVNCLDPLGRSALLIAIENENLEVMELLLSHGVHVGDALLYAIRKEVVGAVELLLS
YRKPSGEKQVPALMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTVPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKTLASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKLFAKDLLDQARSSRELETILNHRDDHSEELDPRECRDLAKLKLAIKYH
QKEFVAQPNCQQLLATLWYDGFPGWRRRHWVVKLITCFTIGLLFPVFSMIYLLAPKSTLG
LFIKKPFIKFICHTASYLTFLFLLLLASQHIVQTDLHVQGPPPTIVEWMILPWVLGFIWA
EIKEMWDGGFTEYVHDWWNLMDFAMNSLYLATISLKMVAYFKYNSSRPREEWEMWHPTLI
AEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQ
LYFYYETEAADEPNHCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLSLYVTNVKARHEFT
EFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTL
PPPFNIIPSPKSMWYLCVWLHSRFYGRGQPTPEEQHKHDNLKEFTERHADSLIQNQQYQE
VIKNLVKRYVAAMIRRTKTDEGLTEENFKELKQDISSFRYEVLDLLGNRKPPRRTYSSSS
EATQPEAEQEDEKEDTEMRNRGARPGGQAQSCSVSFAQADKRKREGQFTVSALFRSMAGL
EDVDDGPKSNGLKKNRWSPSSFVRTSGRLRHFSRSKKDSLRRLGSLFRRVNGHVAQSRLK
SPQQQQTYSISDGVLQPPTSWRDPQAQPENWLTRSSMHLHMLGGESGAIDKNQTPSMSEQ
ANDTDDLLLRPPGLHCASSLTASSSLLLSSSEDLYQGLPGPCESIDSSYWDQEESITTQL
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatggcgcagctgtactacaagaaggcgagttattcgccataccgtgaccgg
ataccactgcaaattgtgcgggccgaggctgagctttcaacagaggagcgtgcctaccta
agtgcagtggagaagggggactatgcaggtgtaaagatggcccttgaacaggctgagatc
tattacaatattaatgttaactgtctggacccactaggacgcagtgcccttctgatcgcc
attgagaacgagaatctggaggtaatggagctgctgctgagtcatggtgtgcatgtggga
gatgctctgctgtacgccattcgcaaggaggtggtgggtgcagtggagttgctgctatcc
tacaggaaacccagcggtgaaaaacaggtacccgcacttatgatggacacccagttctca
gaattcacacctgatatcactcccatcatgctggctgcacacaccaacaattatgagatc
atcaaactacttgtccagcgcaaggtcaccgtaccacggccacaccagatccgctgtgat
tgtgtcgagtgtgtgtccagctcagaggtggacagtctgcggcactcacgctcccgactt
aacatctacaagacactggcgagtccttcactcattgctttgtccagtgaagaccctatt
cttacagcgttccgtctaggctgggagctgaaggagctcagcaaggtggagaatgaattc
cggcaggagtatgaggagctctcacagcaatgcaagctctttgctaaggacttgctggac
caagcaagaagttcacgtgaactagagacgatcctcaaccaccgtgatgaccacagtgaa
gagttggacccccgagaatgcagagacctggccaagctcaagctggccatcaagtaccac
cagaaagagtttgtggctcaacccaattgccagcagctactggccacactgtggtacgat
ggctttcctggatggcggcgacgtcactgggtggtgaagttgatcacatgtttcaccatt
ggcctactctttcctgtcttctccatgatctacctgctggcaccaaagagcacactgggt
ctctttatcaagaaacccttcataaaatttatttgtcatactgcctcatacctgaccttc
ctcttcctcttgctcttggcctcacagcacattgtgcaaactgacctgcatgttcagggt
ccaccacccaccattgtggaatggatgatcctaccttgggttctgggctttatttgggct
gagattaaagagatgtgggatggaggttttactgaatatgttcacgattggtggaacctg
atggactttgctatgaactctctctacctagccactatatctctcaaaatggtggcctac
tttaagtacaacagttcccgtcctcgtgaagagtgggagatgtggcacccaacactgatt
gcagaagcgttgtttgccattgccaacatcttcagctcgcttcggctcatctcacttttc
acagccaattcccacctgggcccactgcagatctcactgggcagaatgttgcttgatata
ctcaagttcctcttcatctactgcctggtgctcttggcctttgctaatggtctcaaccag
ctttatttctactatgaaactgaggcagccgatgagccaaaccactgcaaaggcatccgc
tgtgagaagcagaacaatgccttctccacgttatttgagacacttcagtctctcttctgg
tctgtgtttggtctgctcagcctctacgtaaccaacgtgaaagctcggcacgaattcaca
gaatttgttggggccactatgtttggcacttacaatgtcatctcactggtggtgctgctt
aacatgctcatagctatgatgaacaattcctaccagctcattgctgatcatgctgatatt
gagtggaagtttgcccgcaccaagctttggatgagctactttgatgaaggagggacgctc
ccacctccattcaacatcatccccagtcccaagtcgatgtggtacctgtgtgtctggctg
cacagccgtttctatggtcgaggacagcctacccctgaggaacagcacaaacatgacaac
ctcaaagagttcacggaacgacatgctgacagcctcattcagaaccagcagtatcaggaa
gtgatcaaaaatctggtgaaaagatatgtggcagccatgatccgcagaaccaaaaccgat
gaagggctgactgaggaaaacttcaaggagctcaaacaggacatctcaagtttccgctac
gaggtcctggacctgctgggcaaccgcaagccgccacgccgcacctactcctcaagcagt
gaggccacacaacctgaggctgagcaagaagatgaaaaggaagatacagagatgaggaac
agaggagcaaggcctggaggacaagctcagtcatgttctgtttcatttgcccaagcagac
aagagaaagcgtgagggccaatttacagtttcagctctatttcgctccatggcaggtctg
gaggatgtggatgatggaccaaaaagcaatggcttgaagaaaaacaggtggtccccttca
tcattcgtgcggacgagtggccgcttgcggcacttctcacgctcaaaaaaagactcactg
cgtcgtttaggatcactgtttcgtcgtgtgaatggacacgttgctcaatcacgcttgaag
agtccccagcagcaacaaacctacagcatttcagatggggttttgcaaccgccaacgtcc
tggcgggaccctcaagcacagccagagaactggctgacaagaagcagcatgcacctgcac
atgctcggaggagaatctggtgcaatagacaagaatcaaacaccgtcaatgtcagagcag
gcaaatgatacagatgatctcctgctaaggccccctggtctacactgtgcttccagcctg
actgcctccagttccctcttgctctcctctagtgaggatctgtatcagggcttgccaggg
ccttgtgagagcattgattcctcttattgggatcaggaggagtcaatcaccacacagctc
taa
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