Ictalurus punctatus (channel catfish): 108261349
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Entry
108261349 CDS
T04658
Name
(RefSeq) major histocompatibility complex class I-related gene protein isoform X3
KO
K06751
MHC class I antigen
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
ipu04145
Phagosome
ipu04218
Cellular senescence
ipu04514
Cell adhesion molecules
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108261349
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108261349
04145 Phagosome
108261349
09143 Cell growth and death
04218 Cellular senescence
108261349
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108261349
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108261349
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
108261349
Exosome [BR:
ipu04147
]
Exosomal proteins
Proteins found in most exosomes
108261349
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
Antigens
108261349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
C2-set_3
ig
MHC_I_3
Motif
Other DBs
NCBI-GeneID:
108261349
NCBI-ProteinID:
XP_017317742
Ensembl:
ENSIPUG00000007506
UniProt:
A0A2D0QHA4
LinkDB
All DBs
Position
12:28242815..28257962
Genome browser
AA seq
338 aa
AA seq
DB search
MRHRLNINKATIIHTLVLFLHLQQSSCDVQSISWYFLGSEGLSIPRYTESVTVNDVTLYS
FDSNMKSTAPCPEWLNTTAGQQLWKKTSFLSHHNMANMDLALQTAKSQFNLTGSYADINV
YQGYSRCELYPDGTTKSSLTHAFNGKDFLSLDIDSKTYIASVPQALIYKRAREKNIIWLE
TLVSFYKKTCFERLRMFLEYAPGVRNKKAPEVRLFERQSAGSTLLTCHVTGFYHRAVQVK
WIGADLQLLEDEMNHVLPNGDGTFQTRSSVIRPEENTGDQRYSCVVHHSSLEGNITVTWD
KEEKPFRLYVWITLGCIFIVTIIGLVIRCILKSKDAGI
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagacatcgcctaaacatcaacaaagcaacgattattcatactttagtcttgttctta
catctccagcagtcgagttgtgatgttcaatctatcagttggtatttccttggctctgaa
ggcctcagtattccccgttacacagagagcgtcactgtgaatgatgtgaccctatattcc
tttgacagcaacatgaagtcgacagctccatgtcccgaatggctcaacactacagctggt
cagcaactctggaaaaagaccagttttttatcacaccacaacatggcaaatatggattta
gcactccaaacagccaaatcgcagttcaacctcacaggttcatatgcggacattaacgtt
taccaaggctacagtcgctgtgaactctatccagatggcaccaccaagtcatcgttaacc
catgccttcaatgggaaggatttcttaagtttagatattgacagtaagacgtacattgct
tccgttcctcaagccctcatatataaaagggctagggagaagaatataatctggcttgaa
accttggtgtctttctacaaaaagacctgttttgaacgccttaggatgttcttagagtat
gctcctggtgtcagaaataagaaagctccagaggtcaggcttttcgagaggcagagcgct
ggttccacgctcctcacatgtcatgtgactgggttttaccacagagcagtgcaggtgaag
tggattggggcagatttacagctgctggaggacgagatgaatcatgtgctgcctaatggt
gacggcacgtttcagaccagaagcagtgtgatcagacctgaggagaacacaggagatcag
cgctacagctgtgtagtgcatcacagcagcctagagggaaatattacagtcacctgggat
aaagaagagaaacccttcagactttatgtttggattacactaggctgcattttcatcgtc
actataattgggcttgtaatcagatgcatcttaaaaagtaaagatgctgggatttga
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