Ictalurus punctatus (channel catfish): 108261397
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Entry
108261397 CDS
T04658
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain
KO
K06751
MHC class I antigen
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
ipu04145
Phagosome
ipu04218
Cellular senescence
ipu04514
Cell adhesion molecules
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108261397
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108261397
04145 Phagosome
108261397
09143 Cell growth and death
04218 Cellular senescence
108261397
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108261397
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108261397
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
108261397
Exosome [BR:
ipu04147
]
Exosomal proteins
Proteins found in most exosomes
108261397
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
Antigens
108261397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
ig
Bac_rhamnosid_C
MHC_I_3
Motif
Other DBs
NCBI-GeneID:
108261397
NCBI-ProteinID:
XP_017317779
Ensembl:
ENSIPUG00000008040
UniProt:
A0A2D0QHR7
LinkDB
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Position
12:complement(28210705..28222079)
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AA seq
332 aa
AA seq
DB search
MRHRLNINKARIIHTLVLFLHLQQSRCDVHSISWNFLCSEGLGLPHYSESGTVNDVTLFY
YDSNMKSTAPCPEWLNTTAGQQLWKDTTFKSHYNIGIMALALQTAKSQFNLTGSHADINV
YQAYSRCDLYPDGTTKSSLTHAFNGKDFISLDTDSKTFIASVPQALIYKSIRDKDIIWLE
TVVSYYKKTCFDRLRMFLELAPGVRNKKVPQVRLFERQGAGFTLLTCHVTGFYPRAVQVK
WIGADLQLVDDEMNHVLPNGDGTFQTRSSVIRPEENTGDQRYSCVVHHSSLEGNITVTWG
KEEKPFRLYVWIPLGCVFIVTVVGLVIRGFLL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagacatcgcctaaacatcaacaaagcaaggattattcatactttagtcttgttctta
catctccagcagtcgcgttgtgatgttcattctatcagttggaatttcctttgctctgaa
ggccttggccttccccattactcagagagtggcactgtgaatgatgtgaccctattttac
tatgacagcaacatgaagtcgacagctccatgtcccgaatggctcaacactacagctggt
cagcaactctggaaagataccacttttaaatcacactacaacattggaattatggcttta
gcacttcaaacagccaaatcgcagttcaacctcacaggttcacatgcggacattaacgtt
taccaagcctacagtcgctgtgacctctatccagatggcaccaccaagtcatcgttaacc
catgctttcaatgggaaggactttataagtttagatacggacagcaagacgttcatcgct
tctgttcctcaagccctcatatataaaagtattagggacaaggatataatctggcttgaa
accgtggtgtcgtactacaaaaagacctgttttgaccgccttaggatgttcttagagctt
gctcctggtgtcagaaataagaaagttccacaggtcaggcttttcgagaggcagggcgct
ggtttcacactcctcacgtgtcatgtgactgggttttaccccagagcagtgcaggtgaag
tggattggggcagatttacagctggtggatgacgagatgaatcatgtgctgcctaatggt
gatggcacgtttcagaccagaagcagtgtgatcagacctgaggagaacacaggagatcag
cgctacagctgtgtagtgcatcacagcagcctagaggggaatattacagtcacctggggt
aaagaagagaaacccttcagactttatgtttggattccactaggctgcgttttcatcgtc
actgtagtcgggcttgtaatacgaggctttctgttataa
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