Ictalurus punctatus (channel catfish): 108261435
Help
Entry
108261435 CDS
T04658
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain isoform X1
KO
K06751
MHC class I antigen
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
ipu04145
Phagosome
ipu04218
Cellular senescence
ipu04514
Cell adhesion molecules
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108261435
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108261435
04145 Phagosome
108261435
09143 Cell growth and death
04218 Cellular senescence
108261435
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108261435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108261435
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
108261435
Exosome [BR:
ipu04147
]
Exosomal proteins
Proteins found in most exosomes
108261435
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
Antigens
108261435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
C2-set_3
ig
MHC_I_3
Bac_rhamnosid_C
Motif
Other DBs
NCBI-GeneID:
108261435
NCBI-ProteinID:
XP_053540605
Ensembl:
ENSIPUG00000008222
UniProt:
A0A9F7R8I4
LinkDB
All DBs
Position
12:28274818..28285702
Genome browser
AA seq
341 aa
AA seq
DB search
MRHRLNINKATIIHTLVLFLHLQQSSCDIHSISWNFLGSEGLSLPHYTESDTVNDVTLFY
YDSNMKSTAPCPEWLNTTAGQQYWKEASFKSHYNMANMALALQTAKSQFNLTGSHADINV
YQGYSRCDLYPDGTTKSSLTHAFNGKDFLSLDIDSKMFIASVPQALIYKSIREKDKIWLE
TVVSFYKKTCFDDLRMFLELAPGVRNKKAPEVRLFERQGAGSTILTCHVTGFYPRAVQVK
WIGADLQLVKDEINDVLPNGDGTFQTRSSVIRPEENTGDQRYSCVVHHSSLEGNITVTWG
KEEKPFRLYVRITLGCVFIVTVVGLVIRGFFYNKGQFIVVS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagacatcgcctaaacatcaacaaagcaacgattattcatactttagtcttgttctta
catctccagcagtcgagttgtgatattcattctatcagttggaatttccttggctctgaa
ggcctcagtcttccccattacacagagagtgacactgtgaatgatgtgaccctattttac
tatgacagcaacatgaagtcgacagctccatgtcccgaatggctcaacactacagctggt
cagcaatactggaaagaggccagttttaaatcacactacaacatggcaaatatggcttta
gcacttcaaacagccaaatcgcagttcaacctcacaggttcacatgcggacattaacgta
taccaaggctacagtcgctgtgacctctatccagatggcaccaccaagtcatcgttaacc
catgccttcaatgggaaggacttcttaagtttagatattgacagtaagatgttcatcgct
tctgttcctcaagccctcatatataaaagtattagggagaaggataaaatctggcttgaa
accgtggtgtctttctacaaaaagacctgttttgacgaccttaggatgttcttagagctt
gctcctggtgtcagaaataagaaagctccagaggtcaggcttttcgagaggcagggcgct
ggttccacgatcctcacatgtcatgtgactggattttaccccagagcagtgcaggtgaag
tggattggggcagatttacagctggtgaaggatgagataaatgatgtgctgcctaatggt
gatggcacgtttcagaccagaagcagtgtgatcagacctgaggagaacacaggagatcag
cgctacagctgtgtagtgcatcacagcagcctagagggaaatattacagtcacctggggt
aaagaagagaaacccttcagactttatgttcggattacactaggctgcgttttcatcgtc
actgtagtcgggcttgtaatacgaggcttcttttataataaaggtcaattcattgtcgtc
tcctga
DBGET
integrated database retrieval system
