Ictalurus punctatus (channel catfish): 108262831
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Entry
108262831 CDS
T04658
Name
(RefSeq) DNA nucleotidylexotransferase
KO
K00977
DNA nucleotidylexotransferase [EC:
2.7.7.31
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
108262831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108262831
Enzymes [BR:
ipu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.31 DNA nucleotidylexotransferase
108262831
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
108262831
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_thumb
DNA_pol_lambd_f
DNA_pol_B_palm
HHH_8
BRCT
NTP_transf_2
HHH_5
PTCB-BRCT
Cdd1
Motif
Other DBs
NCBI-GeneID:
108262831
NCBI-ProteinID:
XP_017318673
Ensembl:
ENSIPUG00000018851
UniProt:
W5U8U3
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All DBs
Position
3:complement(25048348..25179854)
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AA seq
501 aa
AA seq
DB search
MFQTTLSTFLRKRRQPELTCAQPQKEMKFREVTVYLVERRMGKSRRNFLTSLARSKGFSV
DNTLSSKVTHIVAEDNPAHELWPWLQEQGIADLGKMNVLDIAWFTQSMKAGRPIPVEAQH
RIQKPSVQPKPEAGPPNSPWLTVSQYACQRRTTLYNHNKILTDALEVLAENYEFIESIGP
CLGFRRAASMLKSLPAPLRNINDTEGLPCLGPETKAVIQDIFECGSSSKVEEVLTDERYR
TLKIFTSVFGVGPKTAEKWYRKGLRSLEQIASDSSIHLNKMQIAGFQYYEDISKPVSKAE
AEAVGHIIKEIAGCFSPDVTMTLTGGFRRGKEFGHDVDFLLTVPRPGKEDGLLPAVINQL
RTQGLLLYSDFQESTFDLSSLPNRRFEAMDHFQKCFLIVKLKKDQVVGQQAEQRCGRDWK
AVRVDLVAPPAERYAFALLGWSGSTQFERDLRRFSRLERNMLLDNHALFDKTTNTFLQAK
TEEDIFTHLGLDYIEPWQRNA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgttccagacaaccctctccacttttttgaggaaacgtcggcaacctgaattgacctgt
gctcagccacaaaaggaaatgaagtttagagaggtgactgtgtacctggtggagagaaga
atgggtaaaagccggagaaacttcctgacaagtttggccaggtcaaagggcttctctgtg
gacaacactttaagtagtaaagtgactcatattgtagcagaggacaatccagcacatgag
ctctggccatggctacaggaacagggcattgcagatctgggcaaaatgaatgtgcttgac
atcgcctggtttacacagagcatgaaagctggcagacccattccagtggaggcacaacat
cgcatacaaaagccatctgtgcagccgaagccagaagcaggcccaccaaacagtccttgg
cttactgtctctcagtatgcatgccaaagacggaccacactgtacaatcataacaagatc
ctcactgatgctctggaagtactggcagagaactatgagttcattgagagtataggtccg
tgtctgggcttccggagagctgcgtctatgctgaagagtcttcctgcgccactacgcaac
attaatgacactgagggacttccctgcctgggaccagagaccaaggctgttatacaggat
atctttgaatgtggatcatcctcaaaagttgaagaagtattaacagatgagaggtatcga
actttgaagattttcaccagtgtgtttggagttggacccaagacagcagagaagtggtat
cgcaaaggcctgcgtagcctggagcagatcgcctctgactccagcatccacttaaataag
atgcaaatagcaggattccagtattatgaagacatctcaaagccagtaagcaaagctgaa
gctgaggcagtgggtcatattataaaggagatcgccggctgtttcagtccggatgtcact
atgactctgactggaggtttccgcaggggaaaagaatttggccatgatgtggattttctc
cttactgtacctagacctggtaaagaggatggacttctacctgctgtgattaaccaactc
aggactcagggacttctcctgtactcagacttccaggagtcaacctttgaccttagcagt
ttgccaaatcgtcggtttgaagccatggaccatttccagaagtgcttcctgattgtgaag
ttgaagaaggaccaggtggttggtcagcaggcagagcagagatgtgggagagactggaaa
gcagtgcgggtggatctggtggcacctccagctgagcgctatgcctttgccctgctgggc
tggagtggctccacgcagtttgaacgagacctgaggagattttcccgtctggagcgaaac
atgctattggacaatcatgccctctttgacaaaactacgaataccttcctgcaggctaag
acagaggaggacatcttcacccatttgggattggactatattgagccttggcagaggaat
gcttag
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