Ictalurus punctatus (channel catfish): 108263677
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Entry
108263677 CDS
T04658
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04217
Necroptosis
ipu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
108263677
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108263677
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108263677
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108263677
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108263677
Peptidases and inhibitors [BR:
ipu01002
]
Cysteine peptidases
Family C64
108263677
Ubiquitin system [BR:
ipu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
108263677
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-A20
OTU
OTU_Vertnin
MIP2_C
Motif
Other DBs
NCBI-GeneID:
108263677
NCBI-ProteinID:
XP_017320207
Ensembl:
ENSIPUG00000016555
UniProt:
W5UBI4
A0A2D0QP80
LinkDB
All DBs
Position
3:complement(6306622..6316975)
Genome browser
AA seq
764 aa
AA seq
DB search
MSQGQNFLPKFLFVSNLLKAMKIRERVPHDVVKPSANSGLLHHLRGMHRYTLEMIRMSQF
PQAFREIIQSAILDRAMQTSLEQEKRLNWCREVKKLVPLRTNGDGNCLLHAASQYMLGVQ
DTDLVLRKALYAVLKETDTSNFRARFQTELLHSQEFTQTGLRYSTKNWEEEWEKIVDMAS
PVASSNGLQFDSLEDIHIFVLSNILRRPIIVIADQVLRSMKSGSSFSPLNVGGIYLPLHW
PPEECYKYPIVLGYDSQHFAPLITIKDGGPEFRALPLINPGRGGFEELRIHFLTEKEQQQ
KERLLNEYLMLMEIPVIGLGYDPTQIIRAARLDEGNLPEDMNLMEDYLQLVNHEYKRWQE
DKDALWAPTSQQAPPPFSVSQLSLIEIRCATPRCTFYVSVDTQPHCHQCFEKRRASGKHE
AVTSRPNRTNHANAPSEPTIPSPRSAPPTAPSLSLYSETHAMKCKTPGCLFTLSVEHDGL
CERCFNARQTGNGQPQGPTHGWGNAQWGPSTRDREKDRERDAEHCSACRQEAFRTFNGLC
PPCMQRSAVVPPQEPRMDMPAWVPSREPERPGTTGHTWHTQAARQCKRSGCQFFGTPEKL
GFCTICYVDYQTNHQAAPAVVQPRHTSEAGFQNVRCRGQGCGAMGKAMLEGYCNKCYVKE
QSARLTEAASRGSTSPPVLRAPKSRPTATLSQAQCRRSGCKNVSPGCTDLCPDCLNRGGQ
REGRRAHAPKEKSKQRCRTQGCDHYANQEKQGYCNECDHFKHLY
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagggccaaaacttcctgcccaagttcctgtttgtgagtaacctcctgaaggcc
atgaagatccgcgagcgtgtgccccatgacgtcgtcaagccgtcagccaacagcggtctg
cttcaccatctccgtggcatgcaccgctacacactggaaatgatccggatgagccagttc
ccgcaggccttccgtgagatcatccagtcggccatcttggaccgagctatgcagacctca
ctggagcaggagaagaggctcaactggtgccgcgaggtcaagaagctggtgccactccgg
acaaacggtgatgggaattgcctgctccatgcagcttcacagtacatgctgggtgtgcag
gatacagacctggtcctgcgtaaggccctttacgccgtgctcaaagagacagacaccagt
aatttcagggcacgttttcaaacagagctgctacactcccaggagtttacccagactggc
ctgcgctacagcaccaagaactgggaagaggaatgggagaagatagttgacatggcgtct
cctgtggccagcagcaacggcctacagttcgactccctggaagacatccacatctttgtg
ctgtcaaatatcctgcgcaggccaattattgtaattgcagatcaagtgctgaggagtatg
aagtctggctcgtctttttcacccctcaacgtaggaggcatttacttgcctcttcactgg
cctccggaagagtgctacaagtatcccatagtgctcggctatgactcgcaacactttgcc
cccctaatcacaatcaaagatggcggcccagagtttcgagcactaccattgatcaatcca
ggaaggggaggctttgaggagctgcgcatccacttcttgacagagaaagagcagcaacag
aaggagaggctgctaaatgaatatctgatgctcatggagatcccggtcattggcctgggt
tatgaccccacgcagattatcagggcagcacgcctcgatgagggcaatctgcccgaggac
atgaacctgatggaagactacctgcagctggtgaatcacgagtacaagcggtggcaggag
gacaaagatgcactatgggcgcccacatcacagcaggcgccgccacccttctccgtctca
cagttgtcactgatagagatccgctgtgctacgccgcgctgcaccttctacgtctctgtg
gacacacagccgcactgccaccagtgctttgaaaagcggcgcgccagcggtaaacacgag
gccgttaccagccgccccaatcgaaccaaccatgccaatgcgccatccgagccaaccatc
ccgagcccacgctcagcaccaccgactgcacccagtctgagcctgtacagtgagacacat
gccatgaagtgcaagacacccggttgtctgttcacgctcagtgtagagcacgatggcttg
tgcgaacgctgcttcaacgcccggcagacgggtaacgggcaaccccagggccctacccac
ggctggggaaatgctcaatggggaccaagcacccgagatcgagaaaaagatcgagaaaga
gatgccgagcactgcagtgcatgtcggcaggaggcctttcggacattcaacggcctttgt
ccaccctgcatgcaaaggagcgctgttgtcccaccgcaggagcccagaatggacatgcct
gcatgggtgccgtccagggagccggagcgccctggtaccactgggcacacgtggcacaca
caggcagcgcgtcagtgcaaacgctcgggctgccagttcttcggcacacccgagaagtta
ggattctgtaccatttgttacgtggactatcagaccaatcaccaggcagctccagcagtg
gtgcagcccagacatacatcggaggcaggttttcagaacgtgcggtgtcgtggtcagggc
tgtggtgccatgggcaaagccatgctcgagggctactgcaacaagtgctacgtgaaggag
cagagcgccagattgactgaagctgctagcagaggctccacttctcctccagtcttgcga
gcgcccaaatcacgtccaacggcgacactcagccaagcccagtgccggcgcagtggctgt
aagaacgtatcgcctggctgcacggacttgtgcccggactgcctgaatcgtggcgggcag
cgtgagggccgtcgtgcccacgcacccaaagagaagagcaagcagcgttgcaggacacaa
ggctgcgatcattatgccaaccaggaaaaacaaggctactgcaacgagtgtgaccacttc
aagcacctatactga
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