Ictalurus punctatus (channel catfish): 108264040
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Entry
108264040 CDS
T04658
Symbol
trpc6b
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108264040 (trpc6b)
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108264040 (trpc6b)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank_4
Ank
Ank_5
Cmr1_C
Motif
Other DBs
NCBI-GeneID:
108264040
NCBI-ProteinID:
XP_017320832
UniProt:
A0A2D0QQZ1
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Position
4:29261994..29277738
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AA seq
875 aa
AA seq
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MRRPMCSEGLPPEQSSARKHSADHGSTKEQCEERHAIFRQRSSYLRRTNADRKITQSQML
AKSRRLAMRRPAYMFSAHSNSLSLAEELFLEAAEYGNIPVVRKMLEELPELNINCVDYMG
QNALQLAVANEHLEVTELLLKKDNLARIGDALLLAISKGYIRIVEAILAHQAFADTSKLT
NSTLQAEINDDFFAYDDDGMRFSQDITPIILASHCHEYEIVHILLLKGARIERPHDYFCK
CNTCVYHQRHDSFSHSRSRINAYKGLASPAYLSLSSEDPVLTALELSNELAVLANIEKEF
KNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGDTELNGHDKTGRPSLIRLKLAIKYEL
KKFVAHPNCQQQLLSIWYENLSGLRQQTTAVKLLVVFGVAVGLPILALLYWIAPSSKLGK
IIRGPFLKFVAHAASFTIFLGLLIMNAADRFEGTTLLPNMTIHDHPTQLFRMKTTPFTWM
EMLIISWVIGMIWAECKEIWSQGPREYLLEPWNLLDFGMLAIFVSSFIARFMAFWHAYTA
QSYVDEHYTDLSNITLPYEVEYYRLARIYWVPSDPQLISEGLYAIAVVLSFSRIAYILPA
NESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMFGMFNLYSYYLGAKQNNAFTTVEESFK
TLFWAIFGLSEVKSVVINNGHKFIENIGYVLYGVYNVIMVIVLLNMLIAMINSSFQEIED
DADVEWKFARAKLWFSYFEEGGTLPVPFNLIPSPKSVLSLTQKIKQLLLTPLHRHKDSLK
EDTELNELGEQKESNYAGSPRSSRYRRIMKRLIKRYIIKAQMDKESDEVNEGELKEIKQD
ISSLRYELLEKSNETEELAEMIRTLAETLSRQHSN
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaccgatgtgctctgagggcttacctccagaacaaagttcagcccggaaacac
agtgcagaccacggatcaacgaaagaacaatgtgaggagagacacgcaatttttcgacaa
agatcttcttacctaaggaggaccaatgctgacagaaaaattacccagagccagatgctc
gctaagagtcgtcgcttggctatgcgccgtccagcatatatgtttagcgctcacagcaac
agcctgtcacttgctgaagagctattccttgaggcagctgaatacggaaacatccctgtt
gtccgaaaaatgctggaggaactgcctgaacttaatatcaactgtgtggactatatgggg
cagaacgcattacagctagcggtggccaatgagcacttggaggtgacggagctgctgctg
aagaaagacaacctggccaggattggtgatgctctgcttctagccatcagcaaaggctac
atccgaatagtggaggccatattggctcaccaggcctttgctgacacatcaaagctaacc
aacagcaccctgcaggctgaaataaatgatgacttctttgcctacgatgatgacggcatg
cgtttttcacaagacattacacccattatcttggcctctcactgccatgagtatgaaatt
gtacacatcctgttactgaagggagctcgcattgagcggccacacgactacttctgtaaa
tgtaacacctgcgtctaccaccagaggcacgattccttcagtcactctcgttcccgtatc
aatgcctacaaggggctggccagcccggcctacctctctctctccagtgaagaccctgtg
ctgactgcgctggagctaagcaatgagctggctgtgctggccaacatagagaaagagttc
aagaacgattataagaagctgtctatgcaatgcaaagacttcgtggttggacttttggac
ttgtgccggaacacagaagaggtggaagccatattgaatggagacacagagttaaacggc
cacgacaaaacgggcagaccgagtctcattcgtctaaaactggccatcaaatatgagctt
aaaaagtttgtagctcatccaaactgtcagcagcagctcctctccatttggtatgaaaat
ctgtctgggctccggcagcagactacggctgtgaagttgctagtggtgttcggcgtggcc
gttggactgccaatcttggctctgctatactggatagcaccatcaagcaagttagggaag
atcatccgtggtcctttcctcaagtttgtggcccatgcagcttcattcaccatcttcctt
ggtctcctgattatgaatgcagcagatcggtttgagggaacgactctccttccaaacatg
accatccatgaccatcctacacagctgttccgcatgaaaaccacccctttcacctggatg
gagatgctgatcatctcctgggtcataggaatgatttgggccgaatgcaaggagatctgg
tctcaaggccctcgggagtatctgttggaaccctggaacctgttggactttgggatgctg
gccatctttgtatcatcattcattgcaagattcatggctttctggcacgcgtacactgca
cagagttatgttgatgagcactacacggacctctctaacataacattgccctacgaggtt
gagtattatcgcttagcacgcatctattgggtgccctctgacccccagctgatctcagag
ggtctgtatgcgattgctgtagtgctgagcttctcgcggattgcctacatcctgccagcc
aatgagagctttggccccctgcagatctccctgggcagaactgtcaaagacatctttaag
ttcatggtgatcttcataatggtgtttgtggcctttatgtttggcatgtttaacctctac
tcctactacctcggagcaaagcaaaacaatgccttcacaactgtcgaagagagctttaaa
acgttgttctgggctatttttggactttccgaggtcaaatcagttgtcattaataatgga
cataaattcatcgaaaatattggctatgtcctttatggagtttacaatgttatcatggtt
atcgtcctcctcaacatgctcatcgctatgatcaacagctcgtttcaggaaattgaggat
gatgcagatgtggagtggaagtttgcccgggctaagctgtggttctcctactttgaggaa
ggtggaactttgcctgtaccttttaacttaattcccagccccaagtctgtgctcagcctg
actcagaaaatcaagcagctcttgttaacacctctgcacagacacaaggacagcctgaag
gaggacacagagctcaatgaactgggtgaacaaaaagaatcaaattatgcaggatcacct
cgatcaagtcgttatcggaggatcatgaaacgattaatcaaaagatatatcataaaagcg
cagatggacaaagagagtgatgaggtaaatgaaggggagctaaaggagataaagcaggac
atctcaagtttgcgctacgagctcttggagaagtctaatgagacagaagaattggcagag
atgatcaggacattggcagaaacattgagcaggcagcacagtaactag
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