Ictalurus punctatus (channel catfish): 108264928
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Entry
108264928 CDS
T04658
Name
(RefSeq) H-2 class II histocompatibility antigen, A-Q alpha chain
KO
K06752
MHC class II antigen
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04145
Phagosome
ipu04514
Cell adhesion molecules
ipu04672
Intestinal immune network for IgA production
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108264928
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108264928
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
108264928
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108264928
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108264928
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108264928
Exosomal proteins of epithelial cells
108264928
Exosomal proteins of breast milk
108264928
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
Ig_3
Ig_2
Motif
Other DBs
NCBI-GeneID:
108264928
NCBI-ProteinID:
XP_017322426
UniProt:
A0A2D0QXF2
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All DBs
Position
5:complement(357697..360185)
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AA seq
247 aa
AA seq
DB search
MHSNLVVLTRLSVWDHPQEQRVLLSESGSKLQPSLFLSLHLLIEASLAGHERPKCTRRSD
KDSSHVLKRGRDISLLNFIQHLLSSLGLEGNFLNRCSLRRLYICSDPPEISVYPKHDVVP
GEENNFICFMRNFYPPHISVNWTRNGVSVTGGVYISQFLLNRDGTFNLFSTLTSSPETEA
DVYSCTVEHEALDSPQTRTWDEPVITPSVTPTVVFAVGIAVGILGLSTGMFFVIKAWCLY
YECNSLL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcaatctcgtggtactcaccaggctctccgtgtgggaccatcctcaggaacag
cgagtgctcctcagtgaaagcggctccaagctgcagccttcactattcctcagcctgcac
cttctgatagaggcgagcctggcgggtcatgaaagacctaaatgtactcgccgcagcgac
aaagactcctctcacgtcctgaagagaggtcgagacatttctttgttaaatttcatccag
cacctgctctcgtcactgggcctcgagggtaactttttaaacagatgttcactcagaaga
ctttatatctgctcagatcctccggagatcagcgtctacccgaaacacgacgtggtgcct
ggagaagaaaataacttcatctgcttcatgaggaatttctatcctccacacatcagcgtg
aactggacgaggaacggtgtgtccgtgacagggggagtgtacatcagccagtttttacta
aacagagacggaaccttcaacttgttctccacactgacgagttctccggagactgaagca
gatgtttacagctgcacggtggagcatgaagctctggactcgcctcagactagaacatgg
gatgaaccagtgataactccgagtgtgactccgacggtggtgtttgcggtgggaattgca
gtgggaatactgggattatccacgggaatgttctttgtcattaaagcatggtgtttatat
tatgaatgtaattctctgctgtag
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integrated database retrieval system
