KEGG   Ictalurus punctatus (channel catfish): 108265899
Entry
108265899         CDS       T04658                                 
Name
(RefSeq) DNA excision repair protein ERCC-6-like 2 isoform X1
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108265899
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    108265899
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII VIGSSK HDA2-3 ERCC3_RAD25_C DinB
Other DBs
NCBI-GeneID: 108265899
NCBI-ProteinID: XP_017324222
Ensembl: ENSIPUG00000000283
UniProt: A0A2D0R0Q4
LinkDB
Position
5:complement(20425285..20441857)
AA seq 1283 aa
MFKVPFEDEKPTFHSNQKPPGPSEPFVLSGTIRVPYTINRYLRDYQREGVRFIYDNYLKS
RGCILGDDMGLGKTIQVISCLAAILQKTGTWQDVENNRPEFLQSQAPSTISRVKKVFLIV
APLSVLYNWKDELDTWGHFKTVIVHGVRKEEELARVNRGRCEIVLTTFETLRLCLNEFNS
LEWTAVIVDEVHKLKNFKAQITQAMKDLKCKVRVGLTGTILQNNLEELWCVMDWANPGCL
GSLSSFKNRFSEPIEQGQKHSATKRALAEGREAIQALAKILCRWFLRRTKALISDQLPKK
DDRVVYCSMTDFQQALYRAVLDTDDVRLLLQSSEKCPCSSGHSRRKCCYKLNSAGVPVRH
MYFSYLAILRKVANHVALLQSKEGTSKKQEKYVTAVCEQVFKKFPDFTERCKQVAFEAMS
DPIYSGKMKVLQRLLTHFIERKDKVLLFSLSTKLLDVLESYCMAEGLEYRRLDGSTKSKE
RIHIVKEFNSTNDINMCLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQ
CKDVKVFRLISLGTVEEIIYLRQIYKQQLQSSVIGNENARRYFEAVQGADGQAGELFGIR
NLFRLQTDGTCLTRRILEREGRVEVGIMTASTQATDERVQKLVPVCVSADTSAQQENRPA
VACGTSTRFSNAEVLDFSSTSEDEDPCGSRSKATYPNAGEVFGPSTGSAANMNLSVLLMK
HMTSGLQRSSESTEDSQSDADSKGLNLENAKVAKGKIEWFLSSDSEEEKNEAKKTCDHVC
MEESEDLEFLHHRYTKAQQRGRDSTNKERRPDWAVQRKRYTEEVESLDSSEDEFPERRVK
FKKSLQRPFSAQNQKSVQFTGLKCRSVHSRKPQIIEGTSTGTIDTLLGGLQEVSYTHSNQ
KVVGSSRAENRLSRAALRDVFELNKHSQLPANHFHYISESGIPQLSEPINGGEQDTPEGH
DKTCLKHQVTHTIETSLHTKTATVSVGATPAAVRKQQLEEMAKFFRAKSVQEFAEELVKN
SSAQRLSRLCEFYSHSSPELTDIIQKTFPKPVTELKPSISPITATCSMSRQRPTSKRTSL
NSIQRPHDEGETGTSVKKRRTKAQSAKDVHHHCVGQTELKNNCLPLPDSGPIPREKSFKT
STDIHPHSEKNTNTCNSSTTASFTELSPCSRDDQADKNSNTTLISDLIGDTSILDDLFKQ
KRSADRPKPATAPIPSPAERMKNRGKDFWDILDEGNEESINKLTDLSQVEKFCRSVNVCA
KSKSESQLESSPLWKKNEKFLWK
NT seq 3852 nt   +upstreamnt  +downstreamnt
atgtttaaggtcccgtttgaagatgagaaacccaccttccattcgaaccagaagcctcct
ggtccctcagaaccatttgttctgtcaggaaccattcgagtgccatacaccattaacaga
tacctacgagactaccagcgagagggggttcgatttatctatgacaactatttgaaatcc
agaggttgcatcctgggtgatgacatgggcctaggaaagaccattcaggttatcagctgc
ttggctgccattttgcagaaaactgggacatggcaggatgttgaaaataacaggccagag
tttctgcagtcacaggcaccatcaacaatatccagagttaagaaggttttcctcattgtg
gctcctctgtctgtgctctacaactggaaagatgagctggacacatggggccatttcaaa
acagtgattgtccatggtgtgaggaaagaggaggaattggcccgtgtgaacagaggaaga
tgtgagattgtcctgacaacatttgagactctaagactctgtctaaatgagttcaacagt
cttgagtggaccgctgtcattgtggatgaagttcacaagcttaagaatttcaaagctcag
atcactcaggctatgaaagatctgaaatgcaaagtgcgtgtgggactgactggtacaatc
ttgcagaacaacctggaggaactctggtgtgtcatggattgggccaacccgggatgcctc
gggtcactgagtagttttaagaacaggttctctgaacctatcgaacagggacagaaacac
agtgcaacaaagagagcactggccgagggccgtgaggccatccaagctctggctaaaatt
ctatgccgctggttcctcaggagaaccaaagcacttattagcgaccagttaccaaaaaaa
gatgacagggtggtgtactgttccatgacagatttccagcaggcgttataccgtgctgtg
ctggacacagatgatgtgaggctgctgttgcagagctccgagaaatgtccatgcagcagc
ggacactccaggaggaagtgctgctacaagctcaattcagccggtgtccctgtcagacac
atgtacttcagttatctggctatactgaggaaggtcgccaatcatgtagccctgctgcag
tctaaagaaggaaccagtaaaaaacaggagaaatatgtgactgctgtctgtgagcaagtc
ttcaagaagtttccagacttcacagaaagatgcaagcaggttgcatttgaggccatgtct
gaccccatctacagtggaaaaatgaaggtgctgcaaaggctgcttactcactttatcgaa
aggaaagacaaagttctccttttttcactttccacaaagctcctggatgttttggagagc
tattgtatggctgaaggtctggagtaccgcaggctggatggaagcaccaagtctaaagaa
cgcatccacattgtcaaggaattcaacagcaccaatgatattaacatgtgccttgtgtct
accatggctggtggtcttggactcaattttgttggggctaatgttgttgtcctatttgat
ccaacatggaatccagcaaatgaccttcaggctatagacagggcatatcgcattgggcag
tgtaaggatgtaaaagtttttaggctcatctctctgggcactgtagaggagatcatctat
ctgcgccagatttacaaacagcagttgcaatcatcagtgattggaaatgaaaatgcaaga
cgctactttgaggcagtgcaaggagcagatggccaagcaggagagttatttgggatcagg
aacctcttccgcctccagactgatggaacttgtctgacacgccgcatcctggagagggag
ggccgtgttgaggtggggatcatgacagccagcacacaggcaacggatgagagggtgcaa
aagctggttccagtgtgtgtatcagcagatacctctgcacaacaggaaaatagaccagca
gtggcatgtggtaccagtaccaggttctctaatgctgaagttctggactttagcagcact
agtgaggatgaggatccctgtggctccagatcgaaagccacatacccaaatgcaggagag
gtttttggacctagcactgggtctgctgcaaatatgaatctatctgttctgctgatgaaa
catatgactagtgggttgcaaaggagctcagagagcactgaagacagtcagtctgatgcg
gactccaagggcttgaacctagagaatgccaaggtagctaaggggaaaatcgaatggttc
ctgtccagtgactctgaggaagagaagaatgaagcaaaaaagacctgtgaccatgtctgc
atggaggagtcagaagacttagagtttcttcaccaccgctatactaaagcacaacagaga
ggtcgagacagtactaacaaggaacggaggccagattgggcagtacaaagaaagagatat
actgaggaggttgagagtttagactcatctgaagatgaatttccagagagaagggtgaag
tttaagaaaagtcttcaacgcccctttagtgcacagaatcaaaaatcagttcagttcaca
ggtttaaaatgtcgaagcgtgcattccagaaagccacaaatcatagagggtaccagcacc
ggcaccatagatacattattaggtgggcttcaggaagtgagctacacccactccaatcag
aaagtggtcggctcgagcagggcagagaaccgcctcagccgtgctgcattacgggatgtg
tttgaactgaacaagcactcgcagctcccagcaaaccattttcattacatatctgagtct
ggaatcccccagttatctgagcccataaacggcggagagcaggatacgccagaaggtcat
gacaagacttgtctgaaacatcaggtcacccacaccatagaaacttccctccataccaaa
actgcaaccgttagtgttggggcgacgcccgctgctgtccgcaagcagcagctagaagaa
atggcaaagttctttagagcgaagtctgtgcaagagtttgcagaagagcttgtgaagaac
agttcagcacagcgactgagcaggctatgtgagttctatagccacagcagccctgagctt
actgacattatccaaaagacctttcctaaacctgtgactgagctgaagccaagtatttca
cctatcactgctacatgcagtatgtctagacaaaggcctacctcaaaaagaacctcctta
aactcaattcagagacctcatgatgaaggagaaacaggaacctcagtgaagaagagaaga
actaaggcacaaagtgctaaagatgtccatcatcattgtgttggtcagactgagctgaaa
aataactgtttgcctttgccagactcaggaccaattccaagagagaagtcttttaaaact
tctacagacattcatcctcactctgaaaaaaacactaatacatgcaattcttccacaact
gcttcctttactgaattgtcaccttgctctagagatgaccaagcagacaaaaactcaaac
acaacccttattagtgatctcataggtgacacctccattctagatgaccttttcaagcaa
aagagaagtgcggatcggccaaagccagcaacagcacccattccctcacccgctgagagg
atgaagaacaggggtaaagacttctgggacattttggatgaggggaacgaggagagcatc
aataagctaacagatctatctcaggtggagaagttttgcaggagtgttaatgtgtgtgca
aagtccaaaagtgaaagccaacttgaaagctctccgctgtggaagaagaatgagaaattc
ctttggaaatga

DBGET integrated database retrieval system