Ictalurus punctatus (channel catfish): 108266005
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Entry
108266005 CDS
T04658
Name
(RefSeq) homeobox protein Nkx-3.1
KO
K09348
homeobox protein Nkx-3.1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108266005
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
108266005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108266005
NCBI-ProteinID:
XP_017324419
Ensembl:
ENSIPUG00000007819
UniProt:
A0A2D0R1I8
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All DBs
Position
5:4655165..4656687
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AA seq
215 aa
AA seq
DB search
MASSNRQLTSFFIEDILSMREEKGEERGEETRGSSAESQIDSRCCKDGGENQDALLIAAL
ATRPASPVDSCTSERTNSPTEAATHADEPNHTHTLAQKQKRSRAAFTHLQVLELEKKFSR
QRYLSAPERAHLASALRLTETQVKIWFQNRRYKTKRRQQLDCYRKSEGNAAVAAAATVDE
DLLRASLLATMYTCYPYRLCVYDPHRHGAWRPTVW
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccaacaggcagctgacgtccttcttcattgaagacattctgtctatgaga
gaagagaagggggaagagaggggagaagagacgaggggaagttcagctgaaagtcagatc
gactcacggtgttgtaaagacggaggagaaaaccaggacgctctcctgatagccgcgtta
gccacaagacctgcgtcacccgtcgactcgtgtacgtcggaaaggacaaactcaccgaca
gaagcggcgacacacgcagacgagccgaaccacacgcacactctggctcagaagcagaag
cgctcgcgcgccgccttcacgcacctgcaggtgctcgagctggagaagaagttcagccgc
cagcgctacctgtccgcaccggagcgcgcgcacctggccagcgcgctgcgcctcaccgag
acccaggtgaagatctggttccagaaccgacgctacaaaaccaagcggaggcagcagctg
gattgttaccggaagtcggaggggaacgctgccgtcgcagccgccgccacggtggacgag
gacttgctcagagcgtcactgctcgccacgatgtacacgtgttatccgtatcggctgtgc
gtgtacgatccacacagacacggcgcgtggaggccgacggtgtggtga
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