Ictalurus punctatus (channel catfish): 108266313
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Entry
108266313 CDS
T04658
Name
(RefSeq) cystathionine beta-synthase-like protein
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00260
Glycine, serine and threonine metabolism
ipu00270
Cysteine and methionine metabolism
ipu00670
One carbon pool by folate
ipu01100
Metabolic pathways
ipu01230
Biosynthesis of amino acids
Module
ipu_M00035
Methionine degradation
ipu_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
108266313
00270 Cysteine and methionine metabolism
108266313
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
108266313
Enzymes [BR:
ipu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
108266313
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Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
Motif
Other DBs
NCBI-GeneID:
108266313
NCBI-ProteinID:
XP_017324911
Ensembl:
ENSIPUG00000009491
UniProt:
A0A2D0R2T2
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All DBs
Position
6:4803339..4819011
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AA seq
572 aa
AA seq
DB search
MPSGLPASESLSPHPIDKMSLLYEDGMPKGKDQVRNSAEEEEEKNERVMERTWIRPDLPS
RCTWKLGDLNTVSPHIHAGWTKTPSIMPNILRHIGDTPLVRINKIPKMFGVKCEILGKCE
YFNAGGSVKDRIAIRMVEDAERDGILKPGDTIIEPTSGNTGIGLAMVAAVKGYRCIIVMP
EKMSMEKVDVLRALGAEIVRTPTAARFDSPESHVGVAWRLKNEIPNSHILDQYRNAGNPL
AHYDNTAEEILKQCDGKIDMLVAGAGTGGTITGIARKLKEKCPNVKIIGVDPVGSILALP
EDLNKTEKTQYEVEGIGYDFLPTVLDRSVVDGWCKTNDEESFNMSRMLIRQEGLLCGGSS
GSAMAAAMKMAKELKEDQRCVVILPDSLRNYMSKFLSDKWMCDKGFLREEDLMIKKPWWW
NLTLQELRLSAPLTVLPSVNIKNTIKILKEKSFDQAPVVDEAGVIVGMVTLGNMLSSVLA
GKVSPSDPVFKVLYKQFKQVHLTDNLGKLSRILETDHFAVVVHDQIQYVTDGSSALKKMV
FGIVTAIDLLNFVTTRERRERTLSESSLPDDL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaggcctgcctgcctcagagtcgctctcccctcaccccatcgacaagatgtcc
ctgctgtacgaagacggcatgccgaagggcaaggaccaggtccggaacagcgcggaggag
gaagaggagaagaacgagcgcgtcatggagaggacctggatccgtccagatctgcccagc
aggtgcacgtggaagctcggggatctgaacacggtctctcctcacatccacgcaggatgg
acaaagactcccagcattatgcccaacatcctgagacacatcggagacactccactggtc
cgcatcaacaagattcccaaaatgttcggggtgaagtgtgagatcttgggtaagtgtgag
tactttaatgctggaggcagtgtgaaggatcgcatcgccattcgtatggtagaggacgcg
gagagagacggcatcctcaaacccggagacaccatcatcgagcccacctctggaaacaca
ggtatcggcctggccatggttgcagcagttaaagggtatcgctgcatcatcgtcatgcct
gagaaaatgagcatggagaaggtggacgtactgcgcgctcttggcgcagagatcgtccgg
acccctaccgccgctcgtttcgactcgcccgagtctcacgtgggcgtggcctggcgcctg
aagaacgagatccccaactcacacattctggatcagtaccgcaacgccggcaacccgctg
gctcactacgacaacacggccgaggagatcttgaagcagtgtgacggtaaaatagacatg
ctggtggcgggagccggaacaggcgggaccatcaccggcatcgcacgcaagctgaaggag
aaatgcccgaacgtcaagattattggcgtggaccctgtgggctcgatcctagcactgcca
gaggacctgaataagaccgagaagacccagtacgaggtggagggaatcggatacgacttc
ctccccaccgtactggaccgatctgtggttgacggttggtgcaagaccaacgacgaggag
tccttcaacatgtcgcgtatgctcatacgacaggaaggacttctgtgcggtggtagttcg
ggatcggccatggctgcagcaatgaagatggcgaaggagttgaaggaagatcagcgctgt
gtggtcatcctgcccgactcgctgcgtaactacatgtccaagttcctcagcgacaagtgg
atgtgtgataaaggctttctgagagaggaggacctgatgatcaagaaaccatggtggtgg
aatctgaccctacaggagctgcgactctctgcccctctaacagttctgccgtctgtcaac
attaagaacaccattaagatcctgaaggagaagtcgttcgaccaggctccggtagtcgac
gaggccggagtgatcgtggggatggtcacactgggtaacatgctgtcctctgtacttgcc
gggaaggtcagtccatctgaccccgtcttcaaagtcctgtataagcaattcaaacaggtt
catctcacagataacctgggaaagctctcccggatcctggagacggaccacttcgccgtg
gttgtgcacgatcagatccagtacgtgacagacggctcatctgctctgaagaagatggtg
tttgggatcgtcacagccatcgacctgctgaactttgtgaccactcgtgagaggagagag
cggacactgtccgagagctcgctccctgatgacctgtag
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