Ictalurus punctatus (channel catfish): 108266644
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Entry
108266644 CDS
T04658
Symbol
rapgef4a
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X2
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04081
Hormone signaling
ipu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
108266644 (rapgef4a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108266644 (rapgef4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108266644 (rapgef4a)
Membrane trafficking [BR:
ipu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
108266644 (rapgef4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
RA_3
Motif
Other DBs
NCBI-GeneID:
108266644
NCBI-ProteinID:
XP_017325739
Ensembl:
ENSIPUG00000020303
UniProt:
W5UI19
A0A2D0R591
LinkDB
All DBs
Position
6:23768282..23812552
Genome browser
AA seq
1009 aa
AA seq
DB search
MISPKMVAAHTSAHSSASAEWIACLDKRPEERSGEDVDIIMARLKRVKAFEKFHPTMLQQ
ICLCGFYECLEKGITLYRQGDIGTSWYAVLSGSLDVKVSETANHQDAVTICTLGIGTAFG
ESVLDNTPRHATIVTREFSELLRIEQREFRSLWEKYRQCMAGLLAPPYGAMESGPSADRM
PDKENLGNSLGSMTRHLNKVPSEKIMRAGKVLRNAILTQAPHMIRDRKYHLKTYKRCCVG
TELVDWQMQQSSCVHTRVQAVGMWQVLLEEGVLNHVDQELNFQDKYLFYRFLDDEQEDAP
LPNEEEKKESEEELQDTLLFLSQMGPDAHMRMILRKQPGQRTVDDLEIIYEELLHIKALS
HLSTTVKRELAGVLIFESHAKAGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEG
DDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHEADVLVLE
KSSVRSSSHAGSSPLKYTVMSGTPEKILEHFLETMKLDSKYTESDPALDDFVLMHCVFIP
NKQLCPLLMAHYQAQASQGSDQERLDYALNNKRRVIRLVLQWAAINTPHLQEEESSLAFL
QDFYMSVSEDAKCIPALKDQLPELESVLKQNSDDANPSQKKHKVLLRQFSMGDEKLQKRQ
PIKSTDEILFKVYCSDHTYTTIRVPVSASVREVVSAVSDKLGSQDDLLVVHLSSAGDKVV
LKPNEVSIFSSLSINGRLFVCSREQINSLTPLPEQEGPSAGSMSTLELMSSKEVAYQMTL
YEWELFNCVHEHELIYHTFGRQHFKKATANLDLFLRRFNEIQLWVVTEVCLCSTLSKRVQ
LLKKFIKIAAHCKEFRNLNSFFAIIMGLSNPAVSRLSQTWEKLPSKFKKVYVEYENLMDP
SRNHRAYRLTVAKLDPPIIPFMPLLIKDMTFTHEGNKTFVDSLVNFEKMRMIANTVRIIR
YCRSQPFNHEAPQATKNHQDVRLYVRQISVIDNQRTLSQLSHKLEPRRP
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgatctctccaaagatggtagcagctcacacctctgctcattcctccgcatctgcagaa
tggatagcctgtctcgacaagcgaccagaggagcgctctggagaagacgtggacatcatc
atggcccgtctgaagcgcgtgaaagcttttgagaagttccaccccaccatgctacagcag
atctgtctatgtggcttctatgagtgcctggaaaaaggcatcacattgtacagacagggt
gatatcggcactagttggtacgctgtcctttctggctcgcttgatgttaaagtctctgaa
acggccaaccatcaggatgcagttaccatttgcacactgggcatcggcacagcatttggg
gagtccgttttggacaatacaccgcgtcacgccacgattgtaacccgagaattcagtgag
ctgctgcgcatcgagcagagggagttcagaagcctgtgggagaagtatcgtcagtgcatg
gctggtctcctggcccctccctatggtgcaatggagagtgggcccagtgctgacagaatg
cctgacaaagagaatctgggtaactccctaggatcaatgaccagacacctgaataaggtt
ccatctgagaagatcatgcgtgcaggtaaagtgctaaggaacgccatcctcacccaagca
cctcacatgatccgagacaggaagtaccacctaaagacttacaagcggtgttgtgtaggc
acagagctggttgactggcagatgcagcagagttcctgtgtacacacacgggttcaggct
gttgggatgtggcaggtgttgctggaggaaggagtactcaaccacgttgatcaggagctg
aatttccaggataagtacctgttctatcgcttcctggatgatgagcaggaagatgcgcca
ctcccaaatgaagaggaaaagaaagagagtgaggaggaactgcaggacaccctcctcttc
ctgtctcagatgggccctgacgcccacatgcgcatgatccttcgaaaacagcctggccaa
aggacagtagatgatttagagattatttatgaggaactgctacatataaaagccttatct
cacctttctacaacagttaaaagggagttagcaggcgtcctcatttttgagtcccatgca
aaagcaggaacagtattgtttaatcagggagaggaaggaacctcgtggtacatcatccta
aagggttcagttaatgtggttatttatggaaagggtgtggtttgcacactgcatgagggg
gatgattttgggaaacttgctctggtaaatgatgcaccgcgtgcagcctccatcgtcctg
cgagaggacaactgccacttcctgagggtggacaaagaggattttaacaggatcctcagg
gatgtagaggcaaatacagtgcgtttgaaggaacatgaagcagatgttttagttcttgaa
aagagcagcgtcagaagctccagccatgcaggctcctcaccactcaaatacactgtgatg
tccggaactccagagaagattctcgaacacttcctagagaccatgaaactcgattccaaa
tatacagagtcagatccagcgttggatgactttgtgcttatgcactgtgtatttataccc
aataagcaactgtgtccactcctcatggcccactaccaggcgcaggcgtctcaaggcagt
gatcaggagaggctggactacgctctgaacaacaagcgcagagtcattcgtctggtgctg
cagtgggctgccattaacaccccccacctgcaggaggaggagagctctctggccttcctc
caggatttttacatgtcagtatctgaagatgccaaatgtattcctgcactcaaagatcag
ctccctgagctggaatctgtcctcaaacagaactcagatgatgcgaatccttctcagaaa
aagcacaaagtgctacttcgccagttcagcatgggagatgagaaactgcagaaacgacag
ccaatcaaaagtacagatgagattctgtttaaggtgtactgtagcgaccacacctacacc
accatccgagtgcctgtgtctgcctctgtcagagaggttgtgtctgctgtatcagataaa
ctgggctcacaagacgaccttctcgtcgttcaccttagctcagctggtgataaagtggtg
ctgaagcccaatgaagtgtccatcttctcctccctcagtattaatggtcgtctgtttgtc
tgctccagggaacagattaactcactgactccactaccagagcaagagggaccgtctgct
ggctccatgtccacccttgagctaatgagctccaaagaggtggcctaccagatgaccctt
tatgaatgggaactcttcaactgtgtgcatgagcacgagttgatttaccacacatttggc
cggcagcactttaaaaaggctacggcgaatctagatctctttctgcgccggttcaatgag
atccagctctgggtggtgacggaggtgtgtctctgctccaccctcagcaaacgcgtccag
ttgctcaagaaattcatcaaaattgctgcccattgtaaagagtttaggaatctgaactcg
ttctttgctattattatgggattaagtaatccagcagtcagccggctcagtcagacatgg
gagaaactgcccagcaagtttaaaaaggtttatgtagagtatgaaaacttgatggacccc
tctaggaaccacagagcataccgcctcaccgtcgctaagctggacccacccatcataccc
ttcatgcctttactgattaaagatatgacgtttactcatgagggcaacaagacttttgtt
gacagtttggtgaattttgagaaaatgcgaatgattgccaacacagtccggataataaga
tactgcagaagtcagcccttcaaccatgaagcacctcaagctaccaagaaccaccaggat
gttcggctctatgtgcgacaaatcagtgtgattgacaaccaacgtactctgtcccaactt
tctcacaagctggagccccgacgcccctga
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integrated database retrieval system
