Ictalurus punctatus (channel catfish): 108267687
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Entry
108267687 CDS
T04658
Name
(RefSeq) tumor necrosis factor ligand superfamily member 12 isoform X1
KO
K05474
tumor necrosis factor ligand superfamily member 12
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108267687
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ipu04052
]
108267687
Cytokines and neuropeptides [BR:
ipu04052
]
Cytokines
Tumor necrosis fators
108267687
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
C1q
PhoR
Fusion_gly
FtsL
Motif
Other DBs
NCBI-GeneID:
108267687
NCBI-ProteinID:
XP_017327502
Ensembl:
ENSIPUG00000003318
UniProt:
A0A2D0RAB0
LinkDB
All DBs
Position
7:18215021..18224562
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AA seq
258 aa
AA seq
DB search
MHRIVQRRRAGPLRSAWSLLGAVALALAASSAVFTAWTWRQTRDLTRSVQNLRDRLDQVN
LQRKAIVQLFLEKRELLESLRVKREAGGAKRKNGNGRKVASHFETGGAKGRYGNGRKVAS
HFEITKDSFKTVENEGIIKGWTEQYLNMTQAVEYNTETGTFKVVRRGVYFLYCQVHFSEQ
KSQYVKLEVTVPQGPSLQCIEGYSTTPTTGFKQFHFLKPCQVSGLLLLEKGAELKAVTGS
DFSLKDSGKHYFGLFKVN
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggatagtgcagaggaggcgtgctgggccgctccgctccgcgtggtcgctgctc
ggtgccgtggcgctcgcgctcgccgcctccagcgctgtgttcaccgcgtggacgtggcga
caaacccgagacctgaccaggtccgtccaaaatctgcgcgaccgcttggatcaggtgaat
ttgcagcgcaaggctattgtccagcttttcctggagaagagggagctgctggagagcctg
cgagtgaagagagaagctggaggggcaaaaagaaaaaatggaaatggaaggaaggtggcc
tctcacttcgagactggaggggcaaaaggaagatacggaaatggaaggaaggtggcctct
cactttgagataaccaaagattcattcaaaacagtggagaatgagggaatcattaaagga
tggactgagcagtacctgaatatgactcaagctgtggagtataacacagagacaggcact
tttaaagtagttcggaggggtgtctacttcctttactgtcaagtgcatttcagtgagcaa
aagagtcagtatgtgaagctggaagtgactgtccctcagggcccctcacttcagtgcata
gagggatacagcaccactccaaccacaggttttaaacagttccacttcctgaagccgtgc
caggtttctggcctcctgcttttagagaaaggcgccgagctcaaggctgtgaccggaagt
gatttcagcctgaaggactcaggcaaacattacttcggcctcttcaaggtgaattag
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