Ictalurus punctatus (channel catfish): 108267743
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Entry
108267743 CDS
T04658
Name
(RefSeq) O-phosphoseryl-tRNA(Sec) selenium transferase
KO
K03341
O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase [EC:
2.9.1.2
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00450
Selenocompound metabolism
ipu00970
Aminoacyl-tRNA biosynthesis
ipu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
108267743
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108267743
Enzymes [BR:
ipu01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.2 O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase
108267743
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Gene cluster
GFIT
Motif
Pfam:
SepSecS
Beta_elim_lyase
Pyridoxal_deC
Motif
Other DBs
NCBI-GeneID:
108267743
NCBI-ProteinID:
XP_017327607
Ensembl:
ENSIPUG00000020145
UniProt:
A0A2D0RAL9
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Position
7:15484666..15500687
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AA seq
485 aa
AA seq
DB search
MNDENFRLSEKLVSASYVRQGVQARCGHQQLIRTLLEQGKCPEEGWNESTIELFLNELAV
MDSNNFLGNCGVGEREGRVASGLVARRHYRLIHGIGRSGDIAAVQPKAAGSSLLNKITNS
VVLDVLRFSGVRSVSSCFVVPMATGMSLTLCFLTLRHRRPSARYILWPRIDQKSCFKSMV
TAGFEPVVIENVLEGDELRTDLEAVEKKVEELGAENILCVHSTTSCFAPRVPDRLEELSV
MCAKYNIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFDE
DFIKEISKMYPGRASASPSLDVLITLLSLGASGYKKLLSERKELYTHLVQELKILADSHG
ERLLHTPHNPISLAMSLDALQANCDKAITQLGSMLFTRQVSGARVVPLGTEQTVSGHTFR
GFMSHSDAYPCPYLNAASAIGITRKDVELSIKRLDKCLKALKKNTKGEKCESVSSPSGPD
DQTVP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacgaaaacttccggctgagtgagaagctggtgtccgcttcctatgtgcggcag
ggtgtccaggctcgctgcggtcatcagcaactcatcaggactctgctagagcagggcaaa
tgtccagaggagggatggaacgaaagcaccatagagctctttctgaatgagctcgcagtc
atggacagtaataatttcttggggaactgtggagttggagagagagagggccgagttgcc
tctggcctggtggcccgaagacattacagattgatccatggcatcggccgctctggtgat
attgctgctgttcagccgaaggccgctggctccagtctcctcaacaagatcaccaattca
gtagtgctggatgttctcagatttagcggtgttagaagtgtgtcatcatgctttgtggtg
cccatggcaactggaatgagcttgacgttgtgtttcctgacactccgacacaggaggcca
tcagcacgctacattctttggcctcgcattgaccagaagtcctgtttcaaatcgatggtc
actgccgggtttgagccggtggtcattgagaatgttctggaaggagatgagttgaggaca
gacctggaggctgtggagaagaaggtcgaggaacttggagctgagaatattctgtgtgtt
cattccaccacttcctgttttgctcctcgcgtccctgacaggttggaagagctctctgtt
atgtgtgccaaatataacatccctcatatagtcaacaatgcctacggagtgcagtcatcc
aaatgcatgcacctcatacaacagggtgcgcgagtgggcagaattgatgcctttgttcaa
agcctggacaaaaatttcatggttcctgttggaggtgccattattgcaggctttgatgag
gacttcattaaggagatcagtaaaatgtaccctggtcgtgcatcagcttccccctctctg
gacgtgcttatcactctgctcagtctcggggccagtggctataaaaaactcctgtctgag
agaaaggagctgtacacccacctggttcaagagctgaagatactggctgatagccatgga
gagagactgctgcatacgccacataatcccatatcactggctatgtctctggatgctctt
caggctaactgtgataaagccattacccagctgggctctatgctcttcaccaggcaggtg
tcgggagccagggttgtgccactgggaaccgaacaaactgtgagcggacacacgtttcgt
ggcttcatgtcacattcggatgcctacccatgcccataccttaatgctgcttctgctatt
ggcatcaccagaaaagacgtggagctctccatcaaaaggctggacaaatgcctcaaggcc
cttaagaaaaacacaaagggagagaagtgtgagtcagtatcatcgccttcaggtcctgat
gaccaaactgttccctga
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