Ictalurus punctatus (channel catfish): 108269077
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Entry
108269077 CDS
T04658
Name
(RefSeq) centrosomal protein of 290 kDa isoform X1
KO
K16533
centrosomal protein CEP290
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108269077
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108269077
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
108269077
Cilium and associated proteins [BR:
ipu03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
108269077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEP209_CC5
GAS
NPV_P10
Motif
Other DBs
NCBI-GeneID:
108269077
NCBI-ProteinID:
XP_017330107
UniProt:
A0A2D0RHU5
LinkDB
All DBs
Position
8:complement(21828714..21873254)
Genome browser
AA seq
2434 aa
AA seq
DB search
MPPAADWTFLMRVDPDNLGDDEEKICDMLLKIYPKDLKESELKKVAQLFRISQTLLKLKL
EEATCAYEIVEKAGAEQARMESQLKEEIADLKTDLEIAQRSAGGRDTRFLRDEIRQMESQ
LEQKDKELVQLEKDMNKERKSNEELSRRVEEAEDENRRMKRENEQLQQDVEFYRKELEQK
DSHQSRDERTEAQKKLNKANQQADQYWENWQRSEDENSQLKSELENLQKNLEESVREMEK
MTDEYNKMKVAVQQTDRFMDQLRRERDQAMLQVRELTQQIQARAEEDDPVMAAVNAKVEE
WRSVLSGKDAEILEYQQMIRDLREKLRAAQMDSDKSNIIALQQAVQERDQQIKLLSERVE
QYTGEMEKNASLIEELKKPLKDKGPGSSTQQRKLDELIGKLQAAERRAEQAERSAHLAES
DAHHKDQELSETLSRIRLYESGTDGLVAAVAEIKESKNQVRIRDREIEAMTREINQLEMK
INDLLDENEELRGRLGLNQKEEVDLTEFRRSKVLKQRQYRAENQVLLKEIERLEEERLEL
KQRIRALVKDKGVTVISSSLLDDETVEEPSRSNRERSTLRPADEDEVKRKNDFLQKELMS
REKELELKRIESLQFKAKQNEMLKENKQLEQGMKEILQAIQEAQSKAPTQTAISIPSLER
LVSALEMKHSEGKVDVIAHLRAQLDQLTGRNEELRQEMKAAREEAANTRTQLMKANEKVA
RLVSEVEAVRQSAGMAVAPKPLLLPEEMTPSSAQVISSLNEYMIQLLQELRNKEDSSKQH
GLALDEYKRKFAVMRHQQGLLYREYQSEKEAWKKEKDCFTELKSKMEEQKELDAVKIQEY
NFWLETLQQDPAEIRRQVAEAARKMTLLRVNERSLTRRYTTLLEQEHHLRKENNKLKDDS
VQMEAAVTERIGYLQRFKEMAAFKMAALQKVLEDSVPSSELERANKQYNDLTMKYRDLLQ
KDNHLIQRTTTLEHLEGENVSLREHISGINKELEITKEKLHTLEQAWEHLNTAGGENGLD
KAAKALANSEIVSVSKRITTLEMKELNERQRAEHAQKMYEHMRSSLKQVEERNFELEVKF
AEMAKQNLEAQRIERELRDELADSVSKEVSDSDRLRISELEKSEAQLRIEVSKLREVSDI
AKMQVFALEARQQSREKEVECLRRQVLDYQAQSDEKALIAKLHQHIVALQLSETAAISRL
EAYTTRLQHLEAQRLRAEQQLDAQQQALWQARQEGRQRARHLRQALHALRRRFSGALPLG
QQEKFSSTMLQLQEDRARAREEARRAQEERSTAEGKAQELELRLKGLEELTATLKDVKGA
QKVSEWHKKLEEARLQELRKNRELVAQREEIRYLKNMVAEQERSIIGLEEELVQQNNLLE
EQQLSWDQREVELERQLDIYEKQQNQIIGSAQKFEECMGSLPDPNQPLAHQLDQALGKLR
EYVRTILETQATCKTMEEKLKEKEAELWQAEQNVLSRDRVINELRLRLPATADRERLLAD
LSKQDDTSSQHAVKIAQQTISNLQCLLDQKEEVLKKYQNLLARARQEQEEAVKKHEEEVR
NLHQQLDLHMDLSLDRFRQTTLELMKKPRLDVPTTKQMERLAEMEQMVTEQDTSLSSLMH
KLKVLSAELERQRHVTAFQAKEHAAQTAKLEERHTCQIKAMSKESEDLRSQLSQMEKELQ
YLSTELEAQKEANVRSPSNTMKNLVERLKAQLALKEKQLKALSKAMLEFRAQMTSQAEQQ
IIANAAQKEEALNVQQIVDKQTKELKARVKELNDELQSWKESVKAGKTRQISLKEEVESL
SRELQRSQKIQSRLQSERDNLEEQLDELKQKVKRLSSGLQGHTEVPSVEALHNKIRRLES
ELDRKNASEPAEKKMAVRDDKSNKEELVRWEEGKKWQARMEKVRSLLKDKEKETESLSKQ
LTTLKELYGRLEQEKLSLQRKLKSRGVTVDQVVGTRATLEADKEIEELRKRNCELEQQIE
IIKQQQALPRDAAMEDMNIRNRYLEERLHSLESQLAKEPLSRPSTSGRGSAGTPTQREHE
LQKENLKLSSENLELRFQLEQANKDLPRLKAQVSDLKEMCDALKKEKAEVEKKLGNIRGP
AQSGRSGKTVPELEKTITLMKKVVERVQRENETLKKSSATAIQAQLAALQHEHEKLKAEY
DRTKEPNQLTSKLESQAKGMEKIVMENERLRRDIRKESEAIEKLRVEKSSLEVRNEKLKL
ELEETNQKLLLAQSKGPSIDGADSKTWKSKVVTRLFENKMKGLENELSKKDASLSELKVQ
LAESREKEQTTRQTVAQLNEQVELLKNIPSDGLAKEFKSVSLANHQLEKEKLRLLERIQK
YEEQFGTHMDGPGYKELQAQIKSSSAEKSQLQDEVSRMTKELANFDPTFFEELEDLKFNY
NVEVKKNIILEEQLKKLSERFGVEVDIPTEGSLS
NT seq
7305 nt
NT seq
+upstream
nt +downstream
nt
atgcctccagctgcagactggaccttcctgatgagggttgaccctgacaatttgggagat
gatgaggagaagatctgcgatatgcttttgaagatttacccaaaagacctgaaggagagc
gagttgaagaaagtagcacagctgttcagaatctcacagaccttactgaagctgaagttg
gaggaagcgacctgcgcctacgaaattgtggaaaaggccggcgctgagcaagctaggatg
gaatcacaactgaaagaggagatagctgatctgaaaacggacctggagattgcgcagcgc
tctgcaggggggagagacacacgcttcctccgggatgaaatccgccagatggagagtcag
ttggaacagaaggataaggagttggtccagctggagaaggacatgaataaagagaggaaa
agcaacgaggagctgtcacggcgagtggaggaggctgaagatgagaacagaaggatgaaa
agagagaacgagcagctccagcaggatgtcgagttctacaggaaggagctggagcagaag
gactcgcaccagagccgagacgagaggactgaggctcagaagaaactcaacaaagccaac
cagcaggccgaccagtactgggagaactggcagcgctctgaggacgagaactctcagctg
aagagcgagctggagaacctgcagaagaacctggaggagtctgtgagagagatggagaag
atgacagacgagtacaacaagatgaaagtggcggtgcagcagacggacagattcatggac
cagctgaggagagagagagaccaggccatgctgcaggtgagagagctgacgcagcagatt
caggctcgggccgaggaggacgatccagtgatggctgcagtcaatgctaaagtggaagag
tggaggagtgtgttatcagggaaagatgctgaaatcctggagtaccagcagatgattcgg
gacctgagagagaagctacgtgcggctcagatggattcagacaaaagcaacatcattgcg
ttgcagcaggcggtgcaagagagagaccagcagatcaagctgctgtctgagcgagtggag
cagtacacaggcgaaatggaaaagaatgcctcgctcattgaggagctcaagaaaccactt
aaagataaaggtccgggctctagcacacagcagaggaaactggacgagctgattggaaag
ctgcaggctgcagagcggagggcagagcaggccgaacgctccgcccatctcgctgaatcc
gacgcccaccacaaagaccaggagctgagcgaaaccctgagccgcattcggctttacgag
tctggcactgatgggctggtagctgccgtagccgagatcaaagaaagcaaaaaccaggtc
agaatccgtgatcgagaaatagaagccatgaccagggaaataaaccaactggagatgaag
atcaacgaccttctggacgagaacgaggagctaagagggcgcctgggtttaaatcagaaa
gaagaagtggatttgaccgagttcaggagatcaaaggtgttaaaacaaaggcagtacaga
gcggagaaccaggttctgctaaaggagattgaacgtctcgaggaggaaaggctggagctc
aagcagcgtatccgtgccctggtgaaggacaaaggtgtcacagtgatcagtagttcactt
cttgatgatgaaactgtagaggaacccagcaggtccaacagggagagatcgaccctcaga
ccagctgatgaggatgaagtcaaaagaaagaatgacttcctgcagaaggagctgatgagc
agagagaaagagctggagctgaagagaatagaatccttgcagtttaaagccaaacagaac
gagatgctgaaggagaacaagcagctggagcagggcatgaaggagattttgcaggccatc
caggaggcgcagagcaaagctcccactcagacggccatcagcatccccagcctggagaga
ctcgtcagcgccctggagatgaagcactcagaggggaaggttgatgtaattgcacatctg
agagcacagctggatcagctgacgggcaggaacgaggaactgaggcaggagatgaaggca
gctcgagaagaggcagccaacacacggactcagctaatgaaggctaatgaaaaggtcgca
cgtttagtgagtgaggttgaggctgtgaggcaatcggcaggcatggctgtagctcctaaa
cctcttcttctgcctgaagaaatgacaccatccagcgcacaagtcatcagttctctcaat
gagtacatgatccagctgttacaggagttaaggaataaagaagattcgagcaagcagcac
ggtctggctttggatgagtacaaaaggaaattcgccgtaatgcgacatcaacaaggactg
ctgtacagagagtaccaaagtgagaaggaggcctggaaaaaggagaaagactgttttacg
gagttgaaatccaaaatggaagagcagaaggagctggatgcggtgaagatccaagaatat
aatttctggctggagactctgcagcaggatccggctgagattaggaggcaggtggccgag
gcggcccgtaaaatgactttactgcgagtgaacgagaggtctctgacccgccgctacacc
accttgttggagcaggagcaccacctgaggaaggagaacaacaagctgaaggatgactca
gtgcaaatggaagctgctgttacagagcgaatcggctacctccagaggttcaaggagatg
gctgcgttcaaaatggcggcactccagaaagtgctggaagacagcgtcccatcttcggag
ctggaaagagcgaacaagcagtacaacgacctcacgatgaaatacagagatctgctccag
aaagacaaccacctcattcagagaaccaccacgctggaacatttggagggtgagaacgtt
tccctccgtgagcacatcagcggcatcaacaaggagctcgagatcacgaaggagaagttg
cacacactagagcaggcctgggaacacctcaacaccgctggaggagagaatggtttggat
aaagctgcaaaggctctggcaaacagcgagatcgtgtccgtgtccaagcgcatcaccacc
ctggagatgaaggagctgaatgagaggcagcgagccgagcacgctcagaagatgtacgag
cacatgaggagctctctcaaacaggtggaggagcggaactttgagctggaggtcaagttt
gccgagatggcgaagcagaacctggaggcacagcggattgagcgtgagctacgagacgag
ctggccgatagcgtcagtaaagaagtcagtgactctgaccggctccgcatctctgagctg
gagaaaagcgaagcccagctcaggatagaggtgtctaagttgcgggaggtttcagacata
gcaaaaatgcaggtatttgctctggaagccaggcagcagtcccgggaaaaggaggtggag
tgtctcaggaggcaggtgcttgactatcaggctcagagtgacgagaaggcccttatcgcc
aagctccatcagcacatcgtggcactgcagctgagcgagacggcagccatcagcaggctt
gaggcctacaccacccgccttcagcacctggaggctcagaggctgcgggcggagcagcag
ttggacgctcagcagcaggcgctgtggcaggcgaggcaggaggggcgtcaacgtgctaga
cacctccgccaggccttgcatgccctgcgcagacggttctccggagcactgccccttggc
cagcaggagaagttctccagcaccatgctgcagctgcaggaggaccgagcaagggcgcgg
gaggaggcacgccgggcgcaggaggagcgcagcacggctgaggggaaagcgcaggagctg
gagctccgactgaagggtcttgaagagctcacagccacactgaaggacgttaaaggagct
cagaaggtgagcgagtggcataagaagctggaggaggctcgtctgcaggagctgaggaag
aacagagagctggtggcgcagcgggaggagatcaggtatctgaagaacatggtggccgag
caggagcgctccatcattggtctcgaggaggaactggtgcagcagaacaacctgttggaa
gagcagcagctctcgtgggatcagagagaggtggaattggagcgacagctggacatctat
gagaaacagcagaaccaaatcatcggatctgctcagaagtttgaagaatgcatgggttct
ctgccagatccaaaccagcctctagctcatcagctggaccaagctctgggtaaactaagg
gagtacgttcgcaccattctggagactcaagccacctgcaaaactatggaggagaagctg
aaggagaaggaggcggagctgtggcaggccgagcagaacgtcctgtcgcgggatcgagtc
atcaacgagctccgactccgtctccctgccaccgccgacagggaaaggctcctcgccgac
ttgagcaagcaggatgacacgagcagccagcatgccgtgaagatcgcacaacagaccatc
agcaacctgcagtgtctcctcgaccagaaagaggaggtcctcaagaagtaccagaacctt
ctggccagggcgagacaggaacaggaagaagcagtaaaaaagcacgaggaggaagtgagg
aacctgcaccaacagctggaccttcacatggacttgtccctggaccgcttcagacagacg
actctggagctgatgaagaaacccagactggacgtcccgaccacgaagcagatggaacgg
ttggctgaaatggagcagatggtgacggagcaggacacgtctctgtcatcgctaatgcac
aagctgaaggtgctgagcgctgagctggagagacagagacacgtcacagcttttcaggcc
aaagagcatgcggcgcaaacggccaaactggaggaaaggcacacgtgtcagataaaggcc
atgtctaaggaatcggaggatctgagatcccagctgtcccagatggagaaagagctgcag
tacctcagcaccgagctggaggcacaaaaagaggccaacgttcgctcgccaagcaacacc
atgaagaatctggttgagcgcctgaaggcccagctggccctcaaagagaagcagctgaag
gccctcagtaaagccatgctcgagtttcgggcgcagatgacgtcccaggctgagcaacag
atcatcgcgaacgcggcccagaaagaggaggcactcaatgttcagcagatcgtggacaag
caaaccaaagagctcaaggctcgtgtaaaggagttgaacgatgagctgcagagctggaag
gagagcgtgaaagcagggaaaacccgacagatctctctgaaggaggaggtagagagcctg
agccgcgagctacagaggagccagaagatccagagcagacttcagagcgagagagacaat
ctggaagaacagctggacgagttgaagcagaaagtgaagagactcagcagcggcctgcag
ggtcatactgaagtcccctcagtagaggctttacacaataagatccgcagactggagtca
gaactggacaggaagaatgcgtcagagccagcggagaaaaaaatggcggtgagggatgac
aagtctaataaagaagaactggtgaggtgggaagagggtaagaagtggcaggcgaggatg
gagaaagtccgaagtcttttaaaagacaaggagaaagagacggaatccctttccaagcaa
ctgaccaccctgaaggagctctacggaaggctggagcaagagaaactgagcctgcagagg
aagttgaagagtcgaggcgtgacggtggatcaggtggtgggcacacgggccaccctcgag
gctgacaaagagatcgaggagctgaggaagaggaactgtgagctggagcaacagatagag
atcatcaagcagcaacaggctttacctcgggacgctgcgatggaggacatgaacatcagg
aaccgctacctggaggagagacttcattctctggaaagccagctggcaaaagagccccta
tccaggccatcgacatctggccggggctcagcagggacaccgacacagagggagcatgag
ttacagaaagagaacctcaagctctccagcgagaacctggagctgcgctttcagttagag
caggctaacaaagacctgccacgtcttaaggctcaggtgtctgacctcaaagaaatgtgt
gatgctctgaaaaaggagaaagcagaggtggaaaagaagctgggtaatatccgtgggcca
gcgcagtctggacgaagtggaaaaactgtccccgaactggagaagaccatcacgctaatg
aagaaggtggtggagcgggtgcaacgagagaacgagaccctgaaaaagagctcggcgacg
gcgatccaagcgcagctcgccgctctacagcacgagcacgagaaactcaaggccgaatac
gacaggacgaaagagccgaatcagctgacatccaaactcgagtcgcaggctaaaggaatg
gagaaaattgtgatggagaatgagcggctgcgcagggacatcagaaaggaatcagaggcc
atagagaagctgcgagtagagaagagcagtctggaagtaagaaatgaaaagctgaagctg
gagctcgaagagaccaaccagaagctcctactggctcagtcgaagggtccgtccatagat
ggagcagatagcaagacctggaaatctaaagttgtgacgaggttgtttgaaaacaaaatg
aaagggctcgagaatgaactctccaagaaggacgcaagtctctcagagctcaaagtgcaa
ctcgcagaatcccgtgagaaagagcaaacaacgcggcaaaccgtcgcacagctgaatgaa
caagtagagctcctgaaaaatattcccagtgatgggctcgctaaggagtttaagtctgtt
agtctagcaaaccaccagctggaaaaggagaagcttcgtcttctcgagcggatccagaaa
tatgaagagcagtttggaacccatatggacggaccaggatacaaagaacttcaggcccaa
ataaagtcatcgagtgctgagaagagccagctacaggacgaagtcagtaggatgaccaaa
gaactggcgaactttgacccgacgttctttgaggagctcgaagatctcaagttcaattac
aacgtagaggtgaagaagaacatcatcctggaggagcagctgaaaaaactgtccgagcgc
ttcggagtggaagtggacatcccgacggaggggtcattgagttaa
DBGET
integrated database retrieval system
