Ictalurus punctatus (channel catfish): 108269205
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Entry
108269205 CDS
T04658
Symbol
xiap
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04120
Ubiquitin mediated proteolysis
ipu04210
Apoptosis
ipu04217
Necroptosis
ipu04510
Focal adhesion
ipu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108269205 (xiap)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108269205 (xiap)
04217 Necroptosis
108269205 (xiap)
09144 Cellular community - eukaryotes
04510 Focal adhesion
108269205 (xiap)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108269205 (xiap)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108269205 (xiap)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108269205 (xiap)
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108269205 (xiap)
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108269205 (xiap)
Peptidases and inhibitors [BR:
ipu01002
]
Peptidase inhibitors
Family I32: IAP family
108269205 (xiap)
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108269205 (xiap)
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108269205 (xiap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
zf-C3HC
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
108269205
NCBI-ProteinID:
XP_017330378
Ensembl:
ENSIPUG00000000501
UniProt:
A0A2D0RIM1
LinkDB
All DBs
Position
8:complement(12798269..12806646)
Genome browser
AA seq
438 aa
AA seq
DB search
MADSNSFEQIETDDGLPDWSAMSTRLNSFRAFPHPEQVPAERLARAGFYFTGESDRVCCF
SCLHTIEDWHQGDNPVERHHDVSPACMFLRCVHHRSLASGTSPQSPGPIYDEEAEAMEFR
LRTREVVDESVYPRIPHMKSEDARLRTFSNWPSWSPVQPHDLVQAGMFYVPESNRQEDRV
QCFCCAGMLVNWEEGDDPWQEHARVYPNCFFILGHDVGNIPSTQPRQRSSAHNSSMESFE
ERLESFRDRVHPINPERLARAGFSSVGDRDCVVCFKCGGRLKNWQPDEDPWEEHAKHYPG
CSFLLAEKGQEFINSVQLRTPGHSSSNGFSSRERAASNVLQSESREDYSTMEDVVVDITS
GVFDSDSDMCQDTLNEDPLKKLETLQREKLCKVCMDSDIAIVFIPCGHLVTCKKCSEPLR
KCPICCADITQKIKTFSS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggctgactctaatagttttgaacagattgaaactgatgacggactgccagactggtct
gcgatgagcacacgattgaactcgttccgggcttttccccatcctgagcaagttcctgca
gagaggttggcgcgagcgggcttctacttcacaggtgaatctgatcgagtgtgctgcttc
agctgcttgcacaccattgaggactggcaccaaggagacaacccagtagaaagacaccat
gacgtctcacctgcctgcatgttcctcaggtgcgttcatcacaggagccttgctagtgga
acttcccctcagtctcctggccccatctatgacgaggaggcagaagccatggagtttaga
ttaagaacacgagaagtagtggatgagtcggtgtatcccaggattccgcatatgaagagc
gaagatgcacggctgaggacgttcagcaactggccctcttggtctccagtacagcctcat
gacctagtgcaagctgggatgttttacgtgccagagagtaacaggcaagaagacagggtg
cagtgtttctgctgcgcaggcatgctggtcaactgggaggaaggtgatgatccctggcag
gaacatgccagagtttacccaaactgctttttcattttgggtcatgatgtggggaacatc
ccctctacgcaaccaagacagagaagcagtgctcataacagttcaatggagtcctttgag
gagcgccttgaaagcttcagggacagagtgcatcccatcaacccagaaaggctggctaga
gctgggttttctagcgtaggtgaccgagactgtgtggtttgcttcaaatgtggaggacgt
ctgaagaactggcagccagatgaggacccgtgggaggagcatgccaagcactatccagga
tgcagtttcctgctcgcagaaaaagggcaagagtttatcaacagcgttcagctaagaact
ccaggacacagctcttcaaatggattttccagtcgtgagagagcagcatcaaatgtactg
cagtcagagagccgtgaggactattcaactatggaagatgtcgttgtagacataaccagt
ggtgtgtttgatagcgattctgatatgtgtcaggatactctgaacgaagaccccttgaag
aagctggagacgctgcagcgtgaaaagctctgcaaagtgtgcatggacagtgacattgcg
atcgtcttcatcccctgcggacacttggtgacttgtaagaagtgctctgagcctcttcgc
aagtgccccatctgttgtgcagacatcacacagaaaatcaagacgttcagctcgtaa
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