Ictalurus punctatus (channel catfish): 108269243
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Entry
108269243 CDS
T04658
Symbol
c8h12orf4
Name
(RefSeq) protein C12orf4 homolog
KO
K28020
Ferry endosomal RAB5 effector complex subunit 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108269243 (c8h12orf4)
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FERRY complex
108269243 (c8h12orf4)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fy-3
Motif
Other DBs
NCBI-GeneID:
108269243
NCBI-ProteinID:
XP_017330476
Ensembl:
ENSIPUG00000011702
UniProt:
A0A2D0RK06
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Position
8:20953659..20975873
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AA seq
551 aa
AA seq
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MKTKGNVSSTEKEFVFEFKAGRNHSVLKVPLQFPVQENVNDLHGRLMLLHNIPCFVEKDL
KKKLLAFIEGETLEDYDREAEAALQRITNGEVDINKLSNLWAKAYTETTLEHARPEEPSW
DEDFADVYHELIHSSASETLLNLEHNYFVSVSELISERDMELKKLQERQAVEMNKVMQEL
GKTLSDQDVNTVAAQHFDAQQVLENKWASELKQVTGIQKQEYQEWVVKLHQDLRNPNNST
ITEEIKVQPGQLTEASELGARVFEEHRQLEESFTIHLGAQLKTMHNLRLVRANVLDFCKH
RRHGSGGSVKLRRLQTAFSLYSSSLCGLVLLVDNRVNSYSGIKRDFATVSQECTDFHFPR
LSKQLEVVQQVVLYARAQRSSKQREQPEMPRNGSNDEKNKNIERNPSNILPGEFYISRHS
NLSEVHIVFHLCVDDNVRSANLTARDPAIMGLRNILKVCCTHDITTITIPLLLVHDMSEE
MTIPWCLKRAELVFKCVKGFMMEMASWDGGISRTVQFLVPQSISEEMFYQLSSMLPQIFR
VSSTLTLTSKH
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactaaagggaatgtgagctctacagagaaagaatttgtgtttgagtttaaggcc
gggagaaatcactctgtcctcaaagtgcctctacagtttcctgttcaagaaaatgtcaac
gatctgcacgggagactcatgctgctccataacattccttgctttgtagaaaaggactta
aagaagaaacttcttgcgttcattgaaggagaaacgttagaagattacgaccgggaagct
gaagcagctctacagaggatcactaatggagaagttgacatcaataaactgagcaacctg
tgggccaaggcctacactgagacaactcttgaacacgcccgacccgaggaacccagttgg
gacgaggacttcgcagacgtgtatcacgaactgatccactcttcggcctcagaaacgctg
cttaacctggaacacaactacttcgtcagtgtgtccgagctcatcagtgagagagacatg
gagctcaagaagctccaggagaggcaggcagtggaaatgaacaaagtcatgcaggagctg
ggaaagaccttgagtgatcaggacgttaatacagtggcagcacagcattttgacgctcag
caagttctggagaacaagtgggccagtgagctgaagcaggtaactggcattcagaagcaa
gagtaccaggagtgggtggttaaactacaccaggaccttcgcaaccctaacaacagcacc
atcactgaggagattaaggtacagcctgggcagctgaccgaggccagcgagttgggagcc
agagtgttcgaggagcatcgacagctggaggagagcttcaccattcatttaggggctcag
ctgaagacgatgcacaacctgcggctggtgcgggccaacgtgttggacttctgcaagcac
agacgccatggcagtggtggcagcgtcaagctacgtcgacttcagacggcattctctctg
tactcgtcctctctctgcggcctcgtcctgctcgtcgataacagagtgaactcctacagc
ggcataaagagagactttgccaccgtgtctcaagaatgcactgatttccatttcccccgg
ctttccaagcagctggaggtggtccagcaggtggtgctgtatgcaagggcgcagcgcagc
agcaagcagcgagaacagcctgagatgccccgaaacgggagcaacgacgagaaaaacaag
aacatagaacgaaacccttctaacatccttcctggtgaattctacattagtcgtcattcc
aacttgtccgaggttcacatagtgtttcatctgtgcgtggacgataatgtgcgctcggca
aacctcacggctcgagacccggccatcatgggcctgcgcaacatcctcaaagtgtgctgc
acgcacgacatcaccaccatcaccatcccgctgctgctcgtgcacgacatgtccgaggag
atgaccattccctggtgtctgaagcgagctgagttggtgtttaaatgtgtgaaaggtttc
atgatggaaatggcatcatgggatggtggcatctcccggactgttcagttcctcgtccct
cagagtatctctgaggaaatgttctaccagctgagcagcatgctgcctcagatcttccga
gtctcctctactctcacgctcacatccaaacactga
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