Ictalurus punctatus (channel catfish): 108269599
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Entry
108269599 CDS
T04658
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108269599
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108269599
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
108269599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
Plasmod_Pvs28
FXa_inhibition
EGF_MSP1_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
108269599
NCBI-ProteinID:
XP_053535332
Ensembl:
ENSIPUG00000017869
UniProt:
W5UKF8
LinkDB
All DBs
Position
Unknown
AA seq
1477 aa
AA seq
DB search
MDRVRVSSVSTYGVELVGVGGPVRTRRTGTGTSTGTSGLTHHMKLSGVNVCGGQCCIGWS
QAPGSQRCTKPNCLPKCQNGGMCLRPQMCVCKPGSKGKLCEQTTLPTSSHPSGPVNGHGN
GHTLVPQRPIPQQVFPQGPASYPLPNTKMTHMTLTMKSAPNSQQPIPFQQHVQHPVSINM
QQGKSQKFVIKPKFYPTHNTHTQLHGAGYTPERSIPLSAGHHSLHVANHTGRIKLVFTPT
ICKLTCSGGRCHNTCEKGNTTTIISENGRATDTLTAPNFRVVVCHLPCMNGGKCNARDKC
QCPPNFTGKFCQMPTQNGPSTNIQTTHTLPLSYGHGQGVVNIHVNHPPEASVQIHQVSQV
DSSSTVQKFQQHSTYSNQQSFLHYPPVTSKSQLGRCFQETTSMQCGKALPGLSKQEDCCG
TIGTSWGFHKCQKCPRKQSIPLLECPHGYKRFNSTRCIDVNECQLSGVCPNGNCINTPGS
YRCLCQPGFIPDSTLTSCYPEAPPPVREEERGACFRVFGGGHQCLHPVSTELSKQLCCCS
VGKAWGGKCERCPLPGTAAFKEICPGGLGYHVTNPYVYKPKPPPPPPVNPEVYERSDGYR
PVITHPKPTVAISPLPVPTVQQPIEAFGFTERHLPVPVVLEKTSPAAPVVLLPSSASQDI
YPTQFAEVDECVISPDICGQGFCYDTAESYNCICDEGYKLNDEATTCVDVDECVDDPQLC
VNGRCKNTPGSFTCVCKLGFNLDEEGTSCIDVNECEAPYVCPENSVCVNTAGSYTCRQCS
RGYTLGQSGQCEDVDECQNGSVCPSGLCYNTLGSYMCSPCPEGFQGKDGKCVDIDECVDG
SVCVHGQCSNREGFFICTCDDGFTPTPDRKACTDIDECQDESVCTRGHCENTEGAFICHC
ESGFTLSESGEQCDDVDECQELTGLCDGVGQCVNNIGSYHCNCPPGYRQVNGTRCQDVDE
CVEETLKLHSVECVNTEGSFYFICEHGYAWTQDPPACEDVDECALNRSVCRHGVCQNTVG
SFICQCDLGYEDKHNGQGCEDMNECELLSDVCGEAVCENVPGSFVCVCPEEGFEFNQMTA
KCLPAAKASSTERKVCYYNLSDENLCDNVLASSVTIEECCCTLGAGWGDNCEVFPCPVQG
SDQFAQMCPAGRGSVPNREDASPVTYKDADECDIFKEEICKDGFCQDTPGAFECYCKAGL
YYDEAKLQCVDTDECLDELNCVDGQCLNNHGSYQCFCTPPAVLDATSKRCMFPGAAEPSE
QQGVFQEICWQSVSPTLTCMNALSNRVTTYTECCCLYGEAWGMQCALCPLKHSEDYAIMC
NIRGSGSVRRPYGQDALVAGPVHEYEVGPEYDPRTLSPNPTFYEDYDESNTGRYEAFEGL
RAEECGVLNGCENGRCVRVQKGYTCDCFDGYTLDMSRMACVDVNECTELNKRMSLCKNGK
CINTQGSYKCQCLPGYTPSERPNYCVPIVPSASTGTE
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggaccgggtgcgcgtgagttccgtgtccacgtacggtgtggagctcgtgggcgtcggt
ggtccggttcggacccgcaggacgggcacgggcacgagcacgggcacgagcggactgacc
catcacatgaagctctccggggtgaacgtctgtggagggcagtgctgtatcggatggagc
caagcacctggatctcagcgctgcacaaaacccaactgtcttcctaaatgccaaaatggc
ggcatgtgccttaggccacagatgtgtgtgtgtaaacctggatcgaaagggaaattatgt
gagcaaaccacactgcccacttcctctcatccatctggtccagttaacggacacggtaac
ggacacacccttgtgccgcagcgtccgattcctcagcaagttttcccacaaggacctgca
tcatatcctctacccaacactaaaatgacacacatgaccctgaccatgaagtcggcaccc
aacagccaacagccaatcccctttcagcaacatgtacagcatcctgtctccataaacatg
caacagggaaaaagccagaagtttgtgatcaagccaaagttttatcccacacacaacaca
cacactcagctgcacggagcaggatacacacctgagcgcagcatccctctgagcgccgga
caccactcactacacgtggccaatcacacgggtcggatcaaactggtcttcacgccgacc
atctgcaagctgacgtgtagcggcggtcgctgccacaacacctgcgagaaaggaaacacc
accaccatcatcagcgagaacgggcgcgccacagacacactcaccgcccccaacttcaga
gttgtggtgtgtcacctgccctgtatgaatggagggaagtgtaacgcgagagataaatgc
cagtgtccaccgaacttcaccggaaagttctgccagatgccgacgcagaacggcccgagc
accaacatccaaaccacacacacactcccactgagctacggccatggccagggtgtggtg
aacattcacgttaatcatccccctgaggcatcggttcagattcatcaggtgtctcaggtg
gacagcagcagcactgtacagaaattccagcagcacagcacgtactccaaccagcagagc
ttcctgcattacccgcccgtcacgtccaagagccagctcggacgctgcttccaggagacc
accagcatgcagtgtgggaaagctctcccgggcctttctaagcaggaggactgctgtggg
acgattggcacttcctggggattccacaaatgccaaaagtgtccaaggaaacaatcgatc
cctctgctcgagtgtccacacgggtacaagaggtttaacagcactcgctgcatcgatgta
aacgagtgccagttgtcgggtgtgtgtcctaacgggaactgcatcaacacacccgggagc
tacaggtgtttatgtcaacctggattcatccccgactccacactgaccagctgctacccc
gaagccccgccccctgtgcgtgaggaggagaggggggcgtgtttccgtgtgttcggtggc
gggcatcagtgtttacaccccgtctccaccgagctgagcaaacagctgtgctgctgcagc
gtggggaaggcgtgggggggcaagtgtgagcgctgtccactgcctggaacagctgcattt
aaggagatttgtcccggcggtttgggttatcatgtgaccaatccgtacgtctataaaccc
aaacctccgcctcctcctcctgtaaacccggaggtgtacgaacgaagcgatggataccgt
cctgtgatcacacacccgaaacccaccgtagcgatctcaccgctgcccgtccccacggtc
cagcagcccatcgaggctttcggattcactgagagacacctacctgtcccagtggtgctg
gagaagacctctccagctgcaccagtcgtccttttaccatccagcgctagtcaggacatc
tacccaactcagtttgcagaagtggacgagtgtgtgattagtcctgatatttgtggtcaa
gggttttgctacgatacggccgagagctacaactgcatctgcgatgagggctacaagctg
aacgacgaggccactacatgcgtagatgttgatgagtgtgtggacgatcctcagctgtgt
gttaacggtcgctgtaagaacacacctggcagtttcacctgtgtgtgtaagctgggcttt
aatctggacgaggagggaaccagctgcatcgatgtaaatgagtgtgaagctccgtacgtg
tgtcccgagaacagtgtgtgtgtgaacacagccggctcgtacacgtgtcgtcagtgcagc
agaggatacacactgggtcagagcggacagtgtgaagacgtagatgagtgtcagaatgga
agtgtgtgtccgtctggtctgtgttataacacactcggctcgtacatgtgcagcccgtgt
cctgaaggcttccagggcaaagatggcaagtgtgtggatatcgatgagtgtgtggacgga
tccgtgtgtgttcatggtcagtgctccaatcgtgaaggtttcttcatctgcacgtgtgat
gacggcttcactcctactccagaccgcaaagcctgcacagacattgatgagtgccaggat
gagagtgtgtgtacgaggggtcactgtgagaacacagagggagcgttcatctgtcactgt
gagagcggatttacactctcagagtcaggagagcagtgtgatgatgtggatgaatgtcag
gaactgacggggctgtgtgatggtgtcggtcagtgtgttaataacattggatcataccac
tgtaactgccccccggggtacaggcaggtcaacggcactcgctgtcaagacgtcgatgag
tgtgtagaggagactctgaagctgcacagcgtggagtgtgtgaacacagagggctcattt
tacttcatctgtgagcacggatacgcctggacacaggatccacccgcgtgcgaggatgtg
gatgagtgcgctctgaacaggagtgtgtgtcgacacggtgtgtgtcagaacactgtggga
tcatttatatgtcagtgtgatctgggatatgaggacaaacacaacggccagggctgtgag
gacatgaatgagtgtgagctcctgagtgatgtgtgtggtgaggcggtgtgtgagaacgta
ccagggtcttttgtgtgcgtgtgtcccgaagagggctttgagttcaaccagatgacggcg
aagtgtttacctgctgctaaagcctcgtccacagagaggaaagtgtgttactacaatctg
agcgatgaaaatctgtgcgataacgttctggcgagcagcgtgaccatcgaggagtgctgc
tgtacgctcggcgcaggatggggcgacaactgcgaggtcttcccctgtcctgtccaaggc
tcagatcagttcgctcagatgtgtccggccggacgaggcagcgttccaaacagagaggac
gcctcacctgttacctacaaagatgctgatgaatgcgacatctttaaggaggagatctgt
aaggacggattctgtcaggacacaccaggagcattcgagtgttactgtaaagctggactg
tactacgacgaggccaaactgcagtgtgtagacacagacgagtgtttagacgagttgaac
tgtgtggatggtcagtgtttgaataatcacggatcgtatcagtgtttctgtacacccccc
gcggtgctcgatgctaccagtaagcgctgtatgttccccggggctgcagagcccagtgag
cagcagggtgtgtttcaggagatctgttggcagagtgtgtctcctacactgacctgcatg
aacgcgctgagtaaccgagtgaccacttacaccgagtgctgctgtctgtacggagaggcc
tggggcatgcagtgtgcactgtgtcctcttaaacactccgaggattatgccatcatgtgt
aatatccgaggctccggatcggtcagacggccgtacggtcaggacgctctggtcgccgga
cccgttcacgagtacgaggtcggcccggagtacgacccacgaactttgagccctaaccca
accttctacgaggactacgacgaatctaacacgggacgatacgaggcgtttgaggggctg
cgggcggaggagtgcggtgtgttaaacggctgtgagaacggacggtgtgtgagggtgcag
aagggatacacctgcgactgtttcgatggatacacactcgacatgtcccgaatggcctgc
gtcgatgtaaacgaatgcaccgagctcaacaagcgaatgtctctgtgcaaaaacgggaaa
tgcatcaacacacagggttcgtataaatgccagtgtttgccgggatacacgccgtcagag
agacccaactactgcgttcccatcgtccccagcgccagcaccggcaccgagtga
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integrated database retrieval system
