Ictalurus punctatus (channel catfish): 108269699
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Entry
108269699 CDS
T04658
Name
(RefSeq) isoleucine--tRNA ligase, mitochondrial isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108269699
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ipu01007
]
108269699
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108269699
Enzymes [BR:
ipu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
108269699
Amino acid related enzymes [BR:
ipu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108269699
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108269699
Prokaryotic type
Other AARSs
108269699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
108269699
NCBI-ProteinID:
XP_017331150
Ensembl:
ENSIPUG00000017082
UniProt:
A0A2D0RMH1
LinkDB
All DBs
Position
9:29917968..29927334
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AA seq
1015 aa
AA seq
DB search
MLLCRVSALARRGLGARRVAALRPALSFSSAGDATASTEAGAQTPGEYRHTVQLPRTDFP
MKLSGQKLLDLELKIQQESGFDQLYTWQRLRKAKKEFCLHDGPPYANGDAHVGHALNKIL
KDIRNRFEMLRGRKVSYVPGWDCHGLPIELKALGELDATHLSPLQIRQKAREFAESAVAS
QRAAFERWGVMADWENCYYTFNGPYEAAQLRVFQDMHGKGLIYQDYKPVFWSPSSRTALA
EAELEYNSEHVSTAVYATFPVNTFPPKLATSLGEMGKVCVLVWTTQPWTIPANQAVCFMP
KAQYSLVKRSDNEQLLLVATERIANLSTVLSTELQNLATFTGADLEGGVCQHPTIPGKEV
PLLPANHVTMAKGTGLVHTAPAHGMEDYSVASHFNLPVECMVDEEGRFTEAAGADLQGQS
VLEEGTSTVISMLRSAGALLKEESCVHSYPYDWRSKKPVLIRASKQWFINTAGLKNAAKE
ALQKVRVMPESARASLLAMLDRRTYWCISRQRSWGVPIPVFYHKQTGEPLVNKHTVAHVA
SVFAEKGSDSWWVEPLETLLPPDVLKKSKAGAVTDYVRGEDVLDIWFDSGTSWAAVLQGE
EGEDRVKRGWLSKQDADPRADVYVEGKDQIGGWFQSSLLTSVAVRNKAPYRALVVHGFVL
SEKGEKMSKSLGNVVDPNVVINGGTDSALSPPYGADVLRWWVAESNVFSEVQIGPKALNA
ARENINKLRNTLRFLLGNLQGFDPRSHAVDSKDMHYIDQYLLHLLREYSIKVTDAYSEFD
CGRVIRLLQAFITRDLSSFYFSIIKDRLYCDAENSLGRRSCQTVLEEILDGVTRSIAPIL
PHLAEEVYQHAPGHDEGETLFRSGWIKSSSVWRKPGLEEAVEGACAIRDSFLSSIPGCNA
VEYDLTIAIEPGLFFELMESLQEEPTSTCSQLTELMMASRTTLTDALPRDLPSDAIISNG
SFLINLEGGVIREESAYSVAAVPISLSRCPRCRRYTSDTPDCLCSRCQTVIGNAP
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtgccgggtttccgctttagcgaggcggggactgggtgcgcggagagtcgcc
gcgctccggcccgctctctccttcagttccgccggggacgcaacggcctctaccgaggct
ggagctcagactcccggggaataccgacacaccgtgcagctcccccgcacagactttccc
atgaagctcagcgggcagaaactgctggatctcgagctgaagatacaacaggagagtggt
tttgaccagctgtacacgtggcagagactgagaaaagccaagaaggagttttgcctccac
gacggaccgccctacgccaacggagacgcccacgtcggccacgccctcaacaagatcctg
aaagatatccgcaaccggttcgagatgctgcgagggaggaaagtgagctacgtacccggc
tgggactgccacggtcttcccatcgagctcaaagccctgggagaactcgacgccacacac
ctgagtcctctacagatcagacagaaagctcgggagtttgcggaatcggcggtcgcgagt
cagcgtgcggcgttcgagcgctggggcgtcatggccgactgggagaactgttactacacg
tttaacgggccgtacgaggcggcgcagctgcgcgtcttccaggacatgcacggcaagggt
ttgatttatcaggactataaacccgtcttctggtctccgtcatccaggacagcgttagca
gaagcagagctggagtataactccgagcacgtgagcacggcagtgtacgctacgttccct
gtaaacacattcccgcctaaactagcgacgagcttaggggagatgggtaaagtgtgtgtg
cttgtgtggacaacacaaccgtggacgattccagccaaccaggcagtgtgcttcatgccc
aaggcacagtactctttagtgaagagaagtgataacgagcagctcctcctggtggccact
gagcgcattgcaaacctcagcactgtactgagcaccgaactacaaaacctggccacattc
acaggcgctgatctggagggcggagtctgccaacatcccacaattcccggaaaggaggtg
cccctcttgccagccaatcatgtgaccatggctaaaggaaccggattggtccatacagct
cctgctcatggcatggaggactacagcgtggcctctcactttaacctgcctgtggagtgc
atggtggatgaggagggcaggtttacagaggcggccggggctgacctacaggggcagagt
gtgctggaggagggaacctcgacagtgatctcgatgctgcgctctgctggagcgttgctg
aaggaggagtcgtgtgtacacagttacccgtacgactggcgcagtaagaagccggtgctg
atccgagccagcaagcaatggttcataaacacggccggcctgaaaaacgcggctaaggag
gcgctgcagaaggtgcgcgtgatgcccgagtcggcccgggcgagtctcttggcgatgctg
gacagacggacgtactggtgtatctcgcgtcagaggagctggggcgtccccatccccgtc
ttctaccacaagcagaccggagaacctctcgtcaacaagcacacggtggctcacgtcgcc
agcgtgttcgcagagaaaggaagcgacagctggtgggtggagcctctggaaacgctactt
cctcccgacgtactgaagaagagtaaagccggagccgtgacagattacgtgcgaggtgag
gacgtgttggacatctggtttgacagcgggacgtcctgggctgctgtgctacagggtgag
gaaggcgaagacagagtcaaacggggctggttaagcaaacaagacgcagacccgagggcg
gacgtgtacgtagaagggaaggatcagatcggcggctggttccagtcgtctctactaacg
agcgtggctgtgcgcaacaaagcaccttatagggcgttggtggtccatggatttgtactc
agtgagaaaggagagaaaatgtccaagtccctgggaaacgtcgtcgaccccaacgttgtc
attaatggaggaacggattcggccctttctcctccgtacggtgcagatgtgttgaggtgg
tgggtcgcagagtccaacgttttctctgaggtccagatcggacccaaagcactgaacgca
gccagggagaacatcaacaagctgaggaacactctgaggttcttgctggggaacctgcag
gggttcgaccctcgcagtcatgctgtggactccaaagacatgcactacatcgaccagtac
ttactgcacctgctccgagagtacagcatcaaggtaaccgacgcctacagcgagtttgac
tgcggtcgagtgattcgccttctgcaggccttcatcacccgagacctgagcagcttctac
ttcagcatcatcaaagacaggctgtactgtgacgcggagaactcgttgggcaggaggtcg
tgtcagacggttctcgaggagattttagatggcgtgacgcgctccatcgctcctatcctg
cctcacctggcggaggaggtgtaccagcatgcgccagggcacgacgaaggcgagactctg
ttccggagcggatggattaaaagcagctctgtgtggaggaaacccgggttggaggaggct
gtcgagggggcgtgtgctatcagagactccttcctgtcctccatcccaggatgcaatgcg
gtcgagtacgacctgaccatcgcaatcgagcccggcctcttcttcgagctcatggagtcc
ctgcaggaggaacccacgtcgacatgttcccagctgacggagctgatgatggcgtcgcgc
accacgctgaccgacgctctgccgcgagacctgccgtctgacgccatcatcagcaacggg
agcttcctcatcaacctggagggtggcgttatccgtgaagagagcgcgtactccgtagcc
gcagtccccatctctctgtcccgctgccctcggtgtcgccgctacacctcggacacgccc
gactgcctgtgctcgcggtgccaaaccgtcatcgggaacgccccatga
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