Ictalurus punctatus (channel catfish): 108269970
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Entry
108269970 CDS
T04658
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2 isoform X1
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108269970
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
108269970
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108269970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RRXRR
Ribosomal_S14
Cytochrom_c3_2
DUF3693
Motif
Other DBs
NCBI-GeneID:
108269970
NCBI-ProteinID:
XP_017331652
Ensembl:
ENSIPUG00000000560
UniProt:
A0A2D0RMB0
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All DBs
Position
9:16964321..16975640
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AA seq
631 aa
AA seq
DB search
MSRQNTLTAAVATLLGATLGGLFLWRSICAQKRKACKIPKDPHPLPVERLGHVELSSTAV
QHPQQELAPPSLAQTPKRLSLPSIEKLLEVPAVVVSSSEEFEEHWPLFQKDLSVFPVLGL
DCEWVKSMRVSIKGKACAVSLLQMATYSGRCMLVRLLAFRDAQLPLPKGLLQVLRDSHVL
KVGVGCYEDGKRLANDHGLALVCTVDLRYLALRERHAVLNNGLSLKSLAADLLNIPLDKS
LGLRCSNWEAENLSREQMLYAARDAQVSVSLFLYLLGLYSEPCLLSEDGTAFSKLAGRCQ
GLVDVPFKWRSEGDDGERKRRCRRSTVDSPESGDQQVPDPRRNKRKPLGVGYSARKSPLY
DNCFLHAPDGQPLCTCDKKKAKWYLDKGIGELVSEEPFVVRLLFEPSGRPDSQKDYYLTA
KENLCVVCGKAESYIRKNIVPHEYRRHFPAEMKDHNSHDILLLCTSCHAASNVYDGFLKQ
QLADEFSAPQGCEEGVRMLEDSDRRRVRSAARALLSANDSMPASRREELLSVVHEYLCKE
GEENEVTEGMLHTAANLETRIFNESYVPHGLKVVQAYAESGLRGLIELERRWRQHFLSSM
QPNFLPPLWSVDHNHEKYLRKYGEDLLINLT
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtccagacagaatactctcactgcagcagtggcaaccttgttaggagccacacttgga
ggactgttcctgtggcgtagtatatgtgcacagaagagaaaagcttgcaaaatcccaaag
gacccccatccgttgcctgtggaacgacttggacatgtggaattgagcagcactgctgtt
cagcacccacagcaggagcttgcaccaccatcgctagcacaaactcccaaacgtctttcg
ctaccatctattgagaagctactggaggtgccagcggtggtggtgagctcatcagaagag
tttgaagaacactggcccttgttccagaaggacctgtctgtctttcctgtcctgggtttg
gactgtgaatgggtaaagagcatgcgtgtgtccatcaaaggcaaagcatgtgcggtgtct
ttgctccaaatggctacgtactcgggccgctgtatgctggtcagactgctggctttccgc
gatgcccagctgcctctccccaaaggcctgctgcaggtgctgagagactctcacgtgctg
aaggtgggcgttggctgttatgaagacggcaagcgcctggccaatgaccacggcctggcc
cttgtgtgtacggtggacttgcgctacttggcacttagagagaggcatgcagtgctgaat
aatggcctgagtttgaagtccctggctgcagacctgctcaatatccccctggataaatca
cttgggctgcgctgtagtaactgggaagctgaaaacctgagtcgggagcagatgttgtac
gcagcacgggatgctcaggtctcagtctctctgtttctctacttgctgggcctctactct
gagccgtgcctgctgagcgaagacgggactgccttctcaaagctggctggccgctgtcag
ggcctggtggatgtgcccttcaagtggcgcagtgaaggggacgacggagaacgcaagcgc
cggtgccgcaggtctactgtagacagtcctgagtctggtgatcagcaagtaccagaccca
cgcaggaataagcggaaacctcttggagttgggtattcagccaggaaatcccccttgtat
gacaactgctttcttcatgcgcctgatgggcagccgctatgtacatgtgacaagaaaaaa
gcaaagtggtaccttgacaaaggaataggagagctggtcagtgaggaacccttcgttgtg
cgtttgttgtttgagccctcgggtcgccctgactctcagaaggactattacctcacggct
aaagaaaatctctgtgtagtatgtggaaaagccgagtcctacatcagaaagaacatcgtt
ccacatgagtataggcgtcacttccctgctgaaatgaaggaccacaactcccatgatatc
ctgctgctgtgcacttcctgtcacgcggcatctaacgtgtacgatggcttcctaaaacag
caactggcagatgaattctctgccccacagggctgtgaggagggtgtaaggatgctggag
gactctgatcggcggcgggtgcgatcagccgctcgtgcccttctcagtgccaatgacagt
atgcccgcttccaggcgagaagagctcctgtcagtcgttcatgagtacctctgcaaggaa
ggagaggagaatgaagtcacagagggaatgctgcacacagctgccaacttggagactagg
atctttaacgagagctatgtgccacatgggctgaaggtggtacaggcatacgctgagagc
ggactgcgcggtctgattgagttggagcggcgctggcgtcagcacttcttgtccagcatg
cagcccaacttcctacctccactgtggtctgtcgaccacaaccatgagaaatacctgcgc
aagtatggagaggacctgctcattaatctgacctga
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