Ictalurus punctatus (channel catfish): 108270293
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Entry
108270293 CDS
T04658
Symbol
bcl11ba
Name
(RefSeq) BAF chromatin remodeling complex subunit BCL11B a isoform X1
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108270293 (bcl11ba)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108270293 (bcl11ba)
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_16
zf-H2C2_5
zf-C2H2_15
Actin_micro
GAGA
DUF3268
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
108270293
NCBI-ProteinID:
XP_017332311
Ensembl:
ENSIPUG00000009933
UniProt:
A0A2D0RQ67
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Position
9:complement(2045578..2104842)
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AA seq
819 aa
AA seq
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MPGRAMSRRKQGNPQHLSQREIISTEAEHVDADLSLAELAGHHTPMLLDPNMVAPLPQGL
GDHDLLTCGQCQETFPLGHILLFIEHKKKQCHGPAGTHGCYDKMADRSSPSPPRAEPRKV
EEPVEIGIQVTPEDEDDRLLTPPKGICPKQESGLAGRDEPSSYICTSCKQPFPSAWFLLQ
HAQNTHGIRIYLEPNGSNTSLTPRITLPPPIGAESIPQSPLTNFLGDNNPFHLLRMTGPL
LREPTPGFVENRLPNTPPFVSPPPRHHLDPHRLERLSAEEMGLISQHPSAFERVMRLTPM
AMETQSMDFSRRLRELAGNNNSTPPLSPSRANPMHRLLNPNPFQPNRKSPFLSTPPLPPM
PPNSTTPPQTQDKSKSCEFCGKTFKFQSNLIVHRRSHTGEKPYKCQLCDHACSQASKLKR
HMKTHMHKPGSVTGRSDDGLSTTSSPEPGTSDVTGDPMKNRDGDFQGEGLGPDNEEEEED
EEEEELENESRPESNFSMDSEFSRNRENGSKPPNDEKSLSLGKMVDNVGLNSIQQYNNLI
VDNRKRLPFSKRGSDGQRDTGDEDSVVEEMDHVERATVNGRNCGSGDSFSGLFPRKPTPI
TSPSLSNSSKRIKIEKDLDMPPASLIPSENVYSQWLVGYAASRHFIKDPFLGFTDSRQSP
FATSSEHSSENGSLRFSTPPGDLLDGGLSGRSGTASGGSTPHLSGGPGPGRPSSKESRRS
DTCEFCGKVFKNCSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHMKTHGQLGKEVYR
CDICQMPFSVYSTLEKHMKKWHGEHLMTNEVKIEQAERS
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcagggcgatgtcccgtcgcaagcagggaaaccctcagcatctatcacagagg
gagattataagcactgaagctgagcatgtggatgcagacctgtcgctggccgaactcgcc
ggccaccacacccccatgctgctggatcccaacatggtcgcccctctgccccagggtctc
ggagaccacgatctcctgacttgtggccagtgccaggagaccttcccactgggccacatc
ctgctcttcatcgagcacaagaagaagcagtgccacggccccgccggcacccacggctgc
tacgacaaaatggcggaccgcagcagtccctcgccgccccgcgccgagccgaggaaggtg
gaggaaccggtcgaaatcggaatccaggtgacacccgaggacgaagacgatagactgctg
acgcctccgaaaggaatttgccctaagcaagagagcggcctggcaggtagagatgaacct
tcgagctacatatgcacgtcatgcaagcaacccttccccagcgcctggttcctcctgcag
catgcccagaacacccacgggatccgcatctacctggaacccaatggctccaacacgtcg
ctcactccacggatcactcttcctcctcctattggtgctgagtccataccccagtcccct
ctgaccaacttcttaggggacaacaaccccttccatctgctccggatgactgggccactg
cttcgagaacccacaccgggcttcgttgagaaccgtctcccaaacacccccccctttgtt
agcccccctccacgccaccacctagatccccatcgcctggaacgccttagcgccgaggaa
atgggtttgatttcccagcatcccagtgccttcgagagagtgatgcgcttgacacccatg
gccatggagacccagtccatggatttctcgcgccgtctgcgagagctggcaggtaacaac
aactccacccctccgctctcacccagtcgtgccaaccctatgcaccgcctgctcaatccc
aaccccttccagcctaaccgcaagtcacccttcctgagcacccctccactgccaccaatg
cccccaaacagcaccacgccacctcagacacaggacaagagcaaatcctgcgaattctgt
gggaagaccttcaagttccagagcaacctgatagtgcaccggcgaagccacacaggagag
aagccttacaagtgtcagctgtgtgatcacgcctgttctcaggccagcaagctgaagcgc
cacatgaagacccacatgcacaaacccggctcagtgacgggtcgctcagacgatggtctc
tctaccactagttcacctgagccaggcactagcgacgtcacaggagatcccatgaaaaac
agggatggtgacttccaaggcgagggactagggcctgacaatgaagaagaggaggaggat
gaagaagaggaggaactggagaacgagagtaggcccgagtcaaactttagtatggactcg
gagttcagccgtaacagggagaatggctccaaacctccaaatgatgagaagagcctctcc
ttgggtaaaatggtagacaatgtggggctgaactctattcagcagtacaataacttgatc
gttgacaatcgtaaaaggcttcccttttcaaagaggggctctgatggacagagagacaca
ggagatgaggactcggtggtggaggaaatggatcatgtggagcgggccaccgtgaacggc
aggaactgtggctcgggtgattctttctcaggcctgttccctcgcaagcccacccctatc
accagtcccagcctctccaactcctccaaaaggatcaaaatagagaaagacttggacatg
cccccagcgtctctaatcccctctgagaacgtctactcccaatggctggtgggttatgca
gcgtcacggcacttcatcaaagacccctttctcggcttcaccgattccagacaatcgcct
ttcgccacctcctccgagcactcgtcagaaaacggcagcctgcggttctccacacctcct
ggggacctgctggacgggggcctttctggacgcagtggcactgccagcggtggcagcacg
cctcatctgtccgggggcccgggaccaggacgtcctagctctaaagagagccggcgcagc
gacacgtgtgagttctgcggcaaggttttcaagaactgcagcaacttgacggtgcaccgg
cgcagccacacgggtgagaggccctacaagtgcgagctgtgcaactacgcctgcgcgcag
agcagcaagctcacccgccacatgaagacgcatgggcagctcggtaaggaagtgtaccgc
tgtgacatttgccaaatgccctttagcgtctacagcacgctagagaaacacatgaaaaag
tggcatggcgaacatttgatgacgaacgaggtcaaaattgaacaagctgagagaagctaa
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